RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 TRIML2Q8N7C3 387 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 STEAP2Q8NFT2 490 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 OR2V1Q8NHB1 315 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 B4GALNT2Q8NHY0 566 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 ZFP90Q8TF47 636 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 TMEM171Q8WVE6 324 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 STON2Q8WXE9 905 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 ZG16BQ96DA0 208 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 AURKBQ96GD4 344 aaPredicted RBP9.27□□□□□ -0.93
TTC28-207ENST00000490475 RAB3IPQ96QF0 476 aaPredicted RBP9.27□□□□□ -0.93
TTC28-207ENST00000490475 SIKE1Q9BRV8 207 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 GSX2Q9BZM3 304 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 PAIP1Q9H074 479 aaKnown RBP9.27□□□□□ -0.93
TTC28-207ENST00000490475 RABEP2Q9H5N1 569 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 ZNF385DQ9H6B1 395 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 RMND5AQ9H871 391 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 UBTD1Q9HAC8 227 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 MED17Q9NVC6 651 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 KCNE5Q9UJ90 142 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 MKLN1Q9UL63 735 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 PCDHB14Q9Y5E9 798 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 GPC6Q9Y625 555 aaPredicted RBP9.27□□□□□ -0.93
TTC28-207ENST00000490475 HIVEP2P31629 2446 aa9.27□□□□□ -0.93
TTC28-207ENST00000490475 HEATR5AQ86XA9 2040 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 ZNF469Q96JG9 3925 aaPredicted RBP9.26□□□□□ -0.93
TTC28-207ENST00000490475 A0A1W2PPR1 153 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 H0YC42 278 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 STX11O75558 287 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 AQP8O94778 261 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 AK1P00568 194 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 FESP07332 822 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 ZCCHC18P0CG32 403 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 PAX1P15863 534 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 CCKARP32238 428 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 RASSF2P50749 326 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 P2RX1P51575 399 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 MVDP53602 400 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 ATP12AP54707 1039 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 TPD52P55327 224 aaPredicted RBP9.26□□□□□ -0.93
TTC28-207ENST00000490475 CARD18P57730 90 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 FUT5Q11128 374 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 CD226Q15762 336 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 SYPL1Q16563 259 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 EXOC3L2Q2M3D2 409 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 TMEM201Q5SNT2 666 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.26□□□□□ -0.93
TTC28-207ENST00000490475 METTL21CQ5VZV1 264 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 HEPHL1Q6MZM0 1159 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 MSANTD1Q6ZTZ1 278 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 C16orf62Q7Z3J2 963 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 HMGN2P46Q86SG4 172 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 LILRA2Q8N149 483 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 ANKFN1Q8N957 763 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 OR5M1Q8NGP8 315 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 OIT3Q8WWZ8 545 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 OSTF1Q92882 214 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 ROPN1LQ96C74 230 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 SPDL1Q96EA4 605 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 SH3YL1Q96HL8 342 aaPredicted RBP9.26□□□□□ -0.93
TTC28-207ENST00000490475 ADGRG7Q96K78 797 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 COX4I2Q96KJ9 171 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 KLHL15Q96M94 604 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 RNF145Q96MT1 663 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 KLHDC3Q9BQ90 382 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 GSX1Q9H4S2 264 aaPredicted RBP9.26□□□□□ -0.93
TTC28-207ENST00000490475 TPT1P8Q9HAU6 139 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 EXD2Q9NVH0 621 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 KLHL14Q9P2G3 628 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 TRIM33Q9UPN9 1127 aa9.26□□□□□ -0.93
TTC28-207ENST00000490475 TLN2Q9Y4G6 2542 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 CENPVL1A0A0U1RR11 272 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 SHISA8B8ZZ34 492 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 NPIPB9F8W1W9 429 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 GTPBP1O00178 669 aaKnown RBP9.25□□□□□ -0.93
TTC28-207ENST00000490475 OIP5O43482 229 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 CXCL13O43927 109 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 DCTN3O75935 186 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 ATP6V1G2O95670 118 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 KRT75O95678 551 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 NUDT14O95848 222 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 AGR2O95994 175 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 ETFAP13804 333 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 PSMA4P25789 261 aaKnown RBP9.25□□□□□ -0.93
TTC28-207ENST00000490475 CRATP43155 626 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 KHKP50053 298 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 CHRNEQ04844 493 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 P2RY6Q15077 328 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 ETFDHQ16134 617 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 MAPK14Q16539 360 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 CTU2Q2VPK5 515 aaKnown RBP9.25□□□□□ -0.93
TTC28-207ENST00000490475 ATAD3BQ5T9A4 648 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 STAC2Q6ZMT1 411 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 ZNF550Q7Z398 422 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 SPATA21Q7Z572 469 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 MSRB3Q8IXL7 192 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 ZNF611Q8N823 705 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 TOR1AIP2Q8NFQ8 470 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 PHOSPHO1Q8TCT1 267 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 ZC3HAV1LQ96H79 300 aaKnown RBP9.25□□□□□ -0.93
TTC28-207ENST00000490475 RSRC1Q96IZ7 334 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms