RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 ASB6Q9NWX5 421 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 EMC3Q9P0I2 261 aa7.18□□□□□ -1.26
USP39-216ENST00000490193 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP39-216ENST00000490193 POC1B-GALNT4F8VUJ3 575 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 M0R1B8 84 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 GTPBP1O00178 669 aaKnown RBP7.17□□□□□ -1.26
USP39-216ENST00000490193 GPR171O14626 319 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 ZNF264O43296 627 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 DNPH1O43598 174 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 SEC22BO75396 215 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 GSTA1P08263 222 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 ITGA5P08648 1049 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 SDC1P18827 310 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 ATP6V1C1P21283 382 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 CFPP27918 469 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 NTF4P34130 210 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 DIO1P49895 249 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 CSNK2A1P68400 391 aaPredicted RBP7.17□□□□□ -1.26
USP39-216ENST00000490193 SLC7A5Q01650 507 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 CHRNEQ04844 493 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 CBFBQ13951 182 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 LASP1Q14847 261 aaKnown RBP7.17□□□□□ -1.26
USP39-216ENST00000490193 QPRTQ15274 297 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 ZSWIM7Q19AV6 140 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 TIGD2Q4W5G0 525 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 SYT14P1Q58G82 188 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 DCST2Q5T1A1 773 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 CDC73Q6P1J9 531 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 LYPD4Q6UWN0 246 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 TMPPEQ6ZT21 453 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 FRMD7Q6ZUT3 714 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 WDR31Q8NA23 367 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 ZNF540Q8NDQ6 660 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 ATP6V1C2Q8NEY4 427 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 PSMA8Q8TAA3 256 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 SLC25A43Q8WUT9 341 aaPredicted RBP7.17□□□□□ -1.26
USP39-216ENST00000490193 ZFAND2BQ8WV99 257 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 CDS1Q92903 461 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 APH1AQ96BI3 265 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 CCDC126Q96EE4 140 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 OTUB1Q96FW1 271 aaPredicted RBP7.17□□□□□ -1.26
USP39-216ENST00000490193 BOD1Q96IK1 185 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 OR5B2Q96R09 309 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 ADAM19Q9H013 955 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 ZCCHC3Q9NUD5 404 aaKnown RBP7.17□□□□□ -1.26
USP39-216ENST00000490193 C1orf109Q9NX04 203 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 DCTN4Q9UJW0 460 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 AMDHD2Q9Y303 409 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 NOSIPQ9Y314 301 aaKnown RBP7.17□□□□□ -1.26
USP39-216ENST00000490193 DTNAQ9Y4J8 743 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 ATP23Q9Y6H3 246 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 MGAM2Q2M2H8 2515 aa7.17□□□□□ -1.26
USP39-216ENST00000490193 A0A087WUV0 522 aaPredicted RBP7.16□□□□□ -1.26
USP39-216ENST00000490193 A0A0A6YYJ9 748 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 NPIPA5A0A0B4J1W7 369 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 CCT8L1PA6NM43 557 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 NPIPA7E9PJI5 369 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 SLCO1B7G3V0H7 640 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 SULT2B1O00204 365 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 SLC28A1O00337 649 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 KIAA0513O60268 411 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 PDE5AO76074 875 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 URI1O94763 535 aaPredicted RBP7.16□□□□□ -1.26
USP39-216ENST00000490193 PMS2P2O95744 297 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 TGFAP01135 160 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 IGHV3-9P01782 118 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 KRT16P08779 473 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 NPIPA8P0DM63 369 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 UROSP10746 265 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 UBL4AP11441 157 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 ITGA2P17301 1181 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 GIFP27352 417 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 GCAP28676 217 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 ASMTP46597 345 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 FOXG1P55316 489 aaPredicted RBP7.16□□□□□ -1.26
USP39-216ENST00000490193 SLC25A3Q00325 362 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 SKP2Q13309 424 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 NDUFAF6Q330K2 333 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 C8orf74Q6P047 294 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 C12orf54Q6X4T0 127 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 DEF8Q6ZN54 512 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 CNPY4Q8N129 248 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 UBE2J2Q8N2K1 259 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 CCNYL1Q8N7R7 359 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 PIGXQ8TBF5 258 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 ACMSDQ8TDX5 336 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 JADE3Q92613 823 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 C1orf159Q96HA4 380 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 FOXN4Q96NZ1 517 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 TSSK3Q96PN8 268 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 SOX7Q9BT81 388 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 TRMOQ9BU70 441 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 ACTRT3Q9BYD9 372 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 BPESC1Q9GZL8 116 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 NMUR2Q9GZQ4 415 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 LAT2Q9GZY6 243 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 QRSL1Q9H0R6 528 aaKnown RBP7.16□□□□□ -1.26
USP39-216ENST00000490193 TNFRSF12AQ9NP84 129 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 SLC17A5Q9NRA2 495 aa7.16□□□□□ -1.26
USP39-216ENST00000490193 SERINC1Q9NRX5 453 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms