RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 CDH12P55289 794 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 SESN3P58005 492 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 TOMM34Q15785 309 aaPredicted RBP12.12□□□□□ -0.47
TRAIP-210ENST00000489948 SHQ1Q6PI26 577 aaKnown RBP12.12□□□□□ -0.47
TRAIP-210ENST00000489948 ARSKQ6UWY0 536 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 LINC00114Q6XXX2 140 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 CADM2Q8N3J6 435 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 SVOPLQ8N434 492 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 LINC00471Q8N535 108 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 ZNF563Q8TA94 476 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 ZNF524Q96C55 264 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 GNRHR2Q96P88 292 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 PRSS27Q9BQR3 290 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 PRR14Q9BWN1 585 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 OSBPL10Q9BXB5 764 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 SLC19A3Q9BZV2 496 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 GABARAPL1Q9H0R8 117 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 SELENONQ9NZV5 590 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 SLC7A7Q9UM01 511 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 B3GNT3Q9Y2A9 372 aa12.12□□□□□ -0.47
TRAIP-210ENST00000489948 SAMHD1Q9Y3Z3 626 aaKnown RBP12.12□□□□□ -0.47
TRAIP-210ENST00000489948 A0A087WUJ7 227 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 K7EM74 188 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 TNFRSF11BO00300 401 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 GNGT2O14610 69 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 APOBEC1P41238 236 aaKnown RBP12.11□□□□□ -0.47
TRAIP-210ENST00000489948 SLC34A1Q06495 639 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 FOXF1Q12946 379 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 C5orf46Q6UWT4 87 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 ASB18Q6ZVZ8 466 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 SLC22A16Q86VW1 577 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 EPHX4Q8IUS5 362 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 FAM109AQ8N4B1 249 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 OR5K1Q8NHB7 308 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 SLC7A13Q8TCU3 470 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 ACOT11Q8WXI4 607 aaPredicted RBP12.11□□□□□ -0.47
TRAIP-210ENST00000489948 PNPLA2Q96AD5 504 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 CRELD1Q96HD1 420 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 JSRP1Q96MG2 331 aaPredicted RBP12.11□□□□□ -0.47
TRAIP-210ENST00000489948 HS6ST2Q96MM7 605 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 ARHGAP9Q9BRR9 750 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 TMEM43Q9BTV4 400 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 ZDHHC11Q9H8X9 412 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 CTPS2Q9NRF8 586 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 OSGIN1Q9UJX0 560 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 DKKL1Q9UK85 242 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 VDAC3Q9Y277 283 aa12.11□□□□□ -0.47
TRAIP-210ENST00000489948 MPDZO75970 2070 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 TRBV4-1A0A0J9YWV2 114 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 SH3PXD2BA1X283 911 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 HTR3EA5X5Y0 456 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 LINC01387J3KSC0 135 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 ERVH48-1M5A8F1 160 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 ZIC3O60481 467 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 FZD7O75084 574 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 E2F6O75461 281 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 BAG2O95816 211 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 RFPL3SP0C7P2 107 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 FAM87AP0C7U9 286 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 SFTPCP11686 197 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 FKBP2P26885 142 aaKnown RBP12.1□□□□□ -0.47
TRAIP-210ENST00000489948 GDF1P27539 372 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 TACR3P29371 465 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 SELENBP1Q13228 472 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 EXOC3L2Q2M3D2 409 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 FGD3Q5JSP0 725 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 DCST1Q5T197 706 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 SLC6A19Q695T7 634 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 C3orf33Q6P1S2 294 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 WDR88Q6ZMY6 472 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-210ENST00000489948 AMIGO2Q86SJ2 522 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 HIPK1Q86Z02 1210 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 RNF113BQ8IZP6 322 aaKnown RBP12.1□□□□□ -0.47
TRAIP-210ENST00000489948 TMEM251Q8N6I4 163 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 FAM83FQ8NEG4 500 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-210ENST00000489948 POC1BQ8TC44 478 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 SLC25A43Q8WUT9 341 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-210ENST00000489948 ALPK1Q96QP1 1244 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 PIGQQ9BRB3 760 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 C8orf4Q9NR00 106 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 RHCGQ9UBD6 479 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 NKX1-2Q9UD57 310 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-210ENST00000489948 OAZ3Q9UMX2 235 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 LHX6Q9UPM6 363 aa12.1□□□□□ -0.47
TRAIP-210ENST00000489948 SPIN1Q9Y657 262 aaPredicted RBP12.1□□□□□ -0.47
TRAIP-210ENST00000489948 A0A087WUU8 490 aa12.09□□□□□ -0.47
TRAIP-210ENST00000489948 TMED7-TICAM2A0A0A6YYA0 188 aa12.09□□□□□ -0.47
TRAIP-210ENST00000489948 ELOA3DA6NLF2 546 aaPredicted RBP12.09□□□□□ -0.47
TRAIP-210ENST00000489948 ZNF208O43345 1280 aa12.09□□□□□ -0.47
TRAIP-210ENST00000489948 GMFGO60234 142 aa12.09□□□□□ -0.47
TRAIP-210ENST00000489948 NPIPB7O75200 414 aa12.09□□□□□ -0.47
TRAIP-210ENST00000489948 RASAL1O95294 804 aa12.09□□□□□ -0.47
TRAIP-210ENST00000489948 ZNF23P17027 643 aa12.09□□□□□ -0.47
TRAIP-210ENST00000489948 ZNF24P17028 368 aa12.09□□□□□ -0.47
TRAIP-210ENST00000489948 HK1P19367 917 aa12.09□□□□□ -0.47
TRAIP-210ENST00000489948 FUT4P22083 530 aa12.09□□□□□ -0.47
TRAIP-210ENST00000489948 ARHGDIAP52565 204 aa12.09□□□□□ -0.47
TRAIP-210ENST00000489948 B3GALT5-AS1P59052 145 aa12.09□□□□□ -0.47
TRAIP-210ENST00000489948 PLGLB1Q02325 96 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms