RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 MED11Q9P086 117 aa19.71■□□□□ 0.75
SMC4-221ENST00000489573 H3BN98 237 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 TP53P04637 393 aaPredicted RBP19.7■□□□□ 0.74
SMC4-221ENST00000489573 POU1F1P28069 291 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 GGT2P36268 569 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 HLCSP50747 726 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 CYP4Z2PQ8N1L4 340 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 TMEM234Q8WY98 164 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 BPIFA2Q96DR5 249 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 FRMD6Q96NE9 622 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 ANGPTL4Q9BY76 406 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 SLC19A3Q9BZV2 496 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 ABI3Q9P2A4 366 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 HRH3Q9Y5N1 445 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 HSPE1-MOB4S4R3N1 261 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 ARGFXA6NJG6 315 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 ZAR1LA6NP61 321 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 B4DXG7 233 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 NKX2-8O15522 239 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 MAKP20794 623 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 MYBPC1Q00872 1141 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 PTGES3Q15185 160 aaKnown RBP19.7■□□□□ 0.74
SMC4-221ENST00000489573 ABHD17BQ5VST6 288 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 TMPRSS11FQ6ZWK6 438 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 ST8SIA1Q92185 356 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 TMEM43Q9BTV4 400 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 DPH1Q9BZG8 443 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 ING2Q9H160 280 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 DSN1Q9H410 356 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 STMN3Q9NZ72 180 aa19.7■□□□□ 0.74
SMC4-221ENST00000489573 MAGEA13PA6NCF6 341 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 UNC119BA6NIH7 251 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 ENO4A6NNW6 628 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 LYNP07948 512 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 IGFBP1P08833 259 aaPredicted RBP19.69■□□□□ 0.74
SMC4-221ENST00000489573 PRKAR1AP10644 381 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 CYB561P49447 251 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 POLR2HP52434 150 aaKnown RBP19.69■□□□□ 0.74
SMC4-221ENST00000489573 NUP107P57740 925 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 IL5RAQ01344 420 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 CRYZQ08257 329 aaKnown RBP19.69■□□□□ 0.74
SMC4-221ENST00000489573 GRINAQ7Z429 371 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 KIF18BQ86Y91 864 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 P3H2Q8IVL5 708 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 NTNG2Q96CW9 530 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 ANKRD10Q9NXR5 420 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 OSGIN1Q9UJX0 560 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 PCDHGB6Q9Y5F9 930 aa19.69■□□□□ 0.74
SMC4-221ENST00000489573 IGKV1D-42A0A075B6H8 117 aa19.68■□□□□ 0.74
SMC4-221ENST00000489573 ANKRD33BA6NCL7 494 aa19.68■□□□□ 0.74
SMC4-221ENST00000489573 CDC42EP2O14613 210 aa19.68■□□□□ 0.74
SMC4-221ENST00000489573 WT1P19544 449 aaPredicted RBP19.68■□□□□ 0.74
SMC4-221ENST00000489573 ISL1P61371 349 aa19.68■□□□□ 0.74
SMC4-221ENST00000489573 CCDC71Q8IV32 467 aaPredicted RBP19.68■□□□□ 0.74
SMC4-221ENST00000489573 GALNT16Q8N428 558 aa19.68■□□□□ 0.74
SMC4-221ENST00000489573 CLDN22Q8N7P3 220 aa19.68■□□□□ 0.74
SMC4-221ENST00000489573 OR2M3Q8NG83 312 aa19.68■□□□□ 0.74
SMC4-221ENST00000489573 OR4K17Q8NGC6 315 aa19.68■□□□□ 0.74
SMC4-221ENST00000489573 FAM81AQ8TBF8 368 aa19.68■□□□□ 0.74
SMC4-221ENST00000489573 TEX47Q8TBZ9 253 aa19.68■□□□□ 0.74
SMC4-221ENST00000489573 EGLN3Q9H6Z9 239 aa19.68■□□□□ 0.74
SMC4-221ENST00000489573 HTR3EA5X5Y0 456 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 ZNF891A8MT65 544 aaPredicted RBP19.67■□□□□ 0.74
SMC4-221ENST00000489573 EFCAB9A8MZ26 197 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 TNFAIP8O95379 198 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 P04436 131 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 SPINK2P20155 84 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 CXCR1P25024 350 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 CASRP41180 1078 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 HTR3AP46098 478 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 ZNF41P51814 821 aaPredicted RBP19.67■□□□□ 0.74
SMC4-221ENST00000489573 DLX5P56178 289 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 OC90Q02509 493 aaPredicted RBP19.67■□□□□ 0.74
SMC4-221ENST00000489573 CD47Q08722 323 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 CRTC2Q53ET0 693 aaPredicted RBP19.67■□□□□ 0.74
SMC4-221ENST00000489573 SLX4IPQ5VYV7 408 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 TMEM236Q5W0B7 351 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 ISLR2Q6UXK2 745 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 ZNF620Q6ZNG0 422 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 MDGA2Q7Z553 956 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 DEPDC4Q8N2C3 294 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 ZNF786Q8N393 782 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 FADS6Q8N9I5 356 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 WDSUB1Q8N9V3 476 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 SGTBQ96EQ0 304 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 SCNM1Q9BWG6 230 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 PROK2Q9HC23 129 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 SACM1LQ9NTJ5 587 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 MED17Q9NVC6 651 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 CDH10Q9Y6N8 788 aa19.67■□□□□ 0.74
SMC4-221ENST00000489573 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 SNPHO15079 494 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 SNX4O95219 450 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 IGF2P01344 180 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 SAGP10523 405 aaPredicted RBP19.66■□□□□ 0.74
SMC4-221ENST00000489573 PRKCAP17252 672 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 CDC42P60953 191 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 INPP5JQ15735 1006 aaPredicted RBP19.66■□□□□ 0.74
SMC4-221ENST00000489573 ARSKQ6UWY0 536 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 PLCZ1Q86YW0 608 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms