RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 SEC24CP53992 1094 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 SCARB2Q14108 478 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 ADRM1Q16186 407 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 TRMT5Q32P41 509 aaKnown RBP15.55■□□□□ 0.08
MDC1-206ENST00000489540 PPP4R4Q6NUP7 873 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 SPATA21Q7Z572 469 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 DMRTC2Q8IXT2 367 aaPredicted RBP15.55■□□□□ 0.08
MDC1-206ENST00000489540 CLIP4Q8N3C7 705 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 PCYOX1LQ8NBM8 494 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 HIPK4Q8NE63 616 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 SLC35B4Q969S0 331 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 ZNF607Q96SK3 696 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 ELAC2Q9BQ52 826 aaKnown RBP15.55■□□□□ 0.08
MDC1-206ENST00000489540 NSRP1Q9H0G5 558 aaKnown RBP15.55■□□□□ 0.08
MDC1-206ENST00000489540 KAT8Q9H7Z6 458 aaKnown RBP15.55■□□□□ 0.08
MDC1-206ENST00000489540 CTPS2Q9NRF8 586 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 CHRNA9Q9UGM1 479 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 PACSIN3Q9UKS6 424 aa15.55■□□□□ 0.08
MDC1-206ENST00000489540 GMNCA6NCL1 334 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 AP3D1O14617 1153 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 SERPINB7O75635 380 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 PRKAR1BP31321 381 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 UQCRC1P31930 480 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 LSP1P33241 339 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 KIR2DL2P43627 348 aaPredicted RBP15.54■□□□□ 0.08
MDC1-206ENST00000489540 MAP2K6P52564 334 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 MTPNP58546 118 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 RAC3P60763 192 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 COPZ1P61923 177 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 CAPRIN1Q14444 709 aaKnown RBP15.54■□□□□ 0.08
MDC1-206ENST00000489540 CYP51A1Q16850 503 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 NANOGP8Q6NSW7 305 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 CPLX4Q7Z7G2 160 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 SERPINA11Q86U17 422 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 SNX32Q86XE0 403 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 CNEP1R1Q8N9A8 125 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 C11orf65Q8NCR3 313 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 RP9Q8TA86 221 aaKnown RBP15.54■□□□□ 0.08
MDC1-206ENST00000489540 LRRC58Q96CX6 371 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 STARD4Q96DR4 205 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 GMPPAQ96IJ6 420 aaPredicted RBP15.54■□□□□ 0.08
MDC1-206ENST00000489540 NANOGQ9H9S0 305 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 GID8Q9NWU2 228 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 ANGPT4Q9Y264 503 aa15.54■□□□□ 0.08
MDC1-206ENST00000489540 UTP20O75691 2785 aaKnown RBP15.54■□□□□ 0.08
MDC1-206ENST00000489540 PRORSD1PA6NEY8 169 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 CYSRT1A8MQ03 144 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 MSTNO14793 375 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 MRASO14807 208 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 PLGP00747 810 aaPredicted RBP15.53■□□□□ 0.08
MDC1-206ENST00000489540 GKN3PP0CG01 181 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 ACAA2P42765 397 aaKnown RBP15.53■□□□□ 0.08
MDC1-206ENST00000489540 POLR2HP52434 150 aaKnown RBP15.53■□□□□ 0.08
MDC1-206ENST00000489540 ZNF239Q16600 458 aaKnown RBP15.53■□□□□ 0.08
MDC1-206ENST00000489540 SYT14P1Q58G82 188 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 REP15Q6BDI9 236 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 FAM214BQ7L5A3 538 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 NET1Q7Z628 596 aaPredicted RBP15.53■□□□□ 0.08
MDC1-206ENST00000489540 ADGRG3Q86Y34 549 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 KIF18BQ86Y91 864 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 SLC30A8Q8IWU4 369 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 MCEMP1Q8IX19 187 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 BHLHE22Q8NFJ8 381 aaPredicted RBP15.53■□□□□ 0.08
MDC1-206ENST00000489540 OR8J3Q8NGG0 315 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 OR5B2Q96R09 309 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 ADAM19Q9H013 955 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 ARMCX1Q9P291 453 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 EMC9Q9Y3B6 208 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 CHST2Q9Y4C5 530 aa15.53■□□□□ 0.08
MDC1-206ENST00000489540 A8MXE2 369 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 TFPIP10646 304 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 TACR3P29371 465 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 SELPLGQ14242 412 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 RNPS1Q15287 305 aaKnown RBP15.52■□□□□ 0.08
MDC1-206ENST00000489540 GUSBP1Q15486 140 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 WBP2NLQ6ICG8 309 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 DHRS4L2Q6PKH6 230 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 TMPPEQ6ZT21 453 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 BTLAQ7Z6A9 289 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 PTOV1Q86YD1 416 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 SLC43A2Q8N370 569 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 OR10A6Q8NH74 314 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 ROBO4Q8WZ75 1007 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 RBM24Q9BX46 236 aaKnown RBP15.52■□□□□ 0.08
MDC1-206ENST00000489540 SRXN1Q9BYN0 137 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 TRIM8Q9BZR9 551 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 FAM107BQ9H098 131 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 COQ10BQ9H8M1 238 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 OSGIN1Q9UJX0 560 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 HDGFL3Q9Y3E1 203 aa15.52■□□□□ 0.08
MDC1-206ENST00000489540 TMED7-TICAM2A0A0A6YYA0 188 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 A0A1W2PNR3 127 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 ZNF208O43345 1280 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 SNX3O60493 162 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 SS18L1O75177 396 aaPredicted RBP15.51■□□□□ 0.07
MDC1-206ENST00000489540 PRKD3O94806 890 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 DRD4P21917 467 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 SSTR2P30874 369 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 CPA2P48052 419 aa15.51■□□□□ 0.07
MDC1-206ENST00000489540 GYS2P54840 703 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms