RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 DAG1Q14118 895 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 KLHL22Q53GT1 634 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 DEFB121Q5J5C9 76 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 ABHD12BQ7Z5M8 362 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-233ENST00000489352 MTDHQ86UE4 582 aaKnown RBP9.87□□□□□ -0.83
HDAC6-233ENST00000489352 STAG3L4Q8TBR4 150 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 GPR151Q8TDV0 419 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 ATP6V1E2Q96A05 226 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 TIMD4Q96H15 378 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 SLC7A10Q9NS82 523 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 DDX18Q9NVP1 670 aaKnown RBP9.87□□□□□ -0.83
HDAC6-233ENST00000489352 NUDT4Q9NZJ9 180 aa9.87□□□□□ -0.83
HDAC6-233ENST00000489352 CCDC151A5D8V7 595 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 CDC14BO60729 498 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 DEAF1O75398 565 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-233ENST00000489352 SKAP2O75563 359 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-233ENST00000489352 CLPXO76031 633 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 IGFBP1P08833 259 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-233ENST00000489352 CTAGE8P0CG41 777 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 CD1DP15813 335 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 MAGEA8P43361 318 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 EVX1P49640 407 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 TRA2BP62995 288 aaKnown RBP9.86□□□□□ -0.83
HDAC6-233ENST00000489352 HGFACQ04756 655 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 CD69Q07108 199 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 IFT88Q13099 833 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 C3orf33Q6P1S2 294 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 ZNF771Q7L3S4 317 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-233ENST00000489352 ZC3HC1Q86WB0 502 aaKnown RBP9.86□□□□□ -0.83
HDAC6-233ENST00000489352 VSTM4Q8IW00 320 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 CTAGE4Q8IX94 777 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 METTL4Q8N3J2 472 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 PIGXQ8TBF5 258 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 PHOSPHO1Q8TCT1 267 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 SLC47A1Q96FL8 570 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 TSPAN17Q96FV3 270 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 OCSTAMPQ9BR26 566 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 LACRTQ9GZZ8 138 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 UBQLN4Q9NRR5 601 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 SERINC1Q9NRX5 453 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 TENM2Q9NT68 2774 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 TMEM45AQ9NWC5 275 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 SEC14L4Q9UDX3 406 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 SLC12A4Q9UP95 1085 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 RNF11Q9Y3C5 154 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 DOCK11Q5JSL3 2073 aa9.86□□□□□ -0.83
HDAC6-233ENST00000489352 RYR2Q92736 4967 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 A0A087WV62 115 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 GXYLT2A0PJZ3 443 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 TTC36A6NLP5 189 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 GOLGA6L22H0YM25 854 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 C3orf84H3BNL1 204 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 PDLIM1O00151 329 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 GTPBP1O00178 669 aaKnown RBP9.85□□□□□ -0.83
HDAC6-233ENST00000489352 FOXH1O75593 365 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 IGKV1D-16P01601 117 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 NGFRP08138 427 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 MYZAPP0CAP1 466 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 ALDH3B1P43353 468 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 RELBQ01201 579 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 TEKQ02763 1124 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 SNTB2Q13425 540 aaKnown RBP9.85□□□□□ -0.83
HDAC6-233ENST00000489352 C3orf36Q3SXR2 165 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 VPS26BQ4G0F5 336 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 SGO1Q5FBB7 561 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 KLF17Q5JT82 389 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-233ENST00000489352 ABLIM2Q6H8Q1 611 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 KRT80Q6KB66 452 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 TMEM107Q6UX40 140 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 JAZF1Q86VZ6 243 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 ZNF527Q8NB42 609 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 OR52E2Q8NGJ4 325 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 PIK3R3Q92569 461 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 RAB1CQ92928 201 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 CFAP36Q96G28 342 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 GAL3ST1Q99999 423 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 ALG9Q9H6U8 611 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 IPPKQ9H8X2 491 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 SLC35C2Q9NQQ7 365 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 NMRK1Q9NWW6 199 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-233ENST00000489352 ACOT9Q9Y305 439 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 NOX1Q9Y5S8 564 aa9.85□□□□□ -0.83
HDAC6-233ENST00000489352 PPIAL4EA0A075B759 164 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 PPIAL4CA0A0B4J2A2 164 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 ZNF716A6NP11 495 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 PPIAL4DF5H284 164 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 H3BNH8 94 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 MBD3O95983 291 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 PPIAL4FP0DN26 164 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 TFPIP10646 304 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 PRKCAP17252 672 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 P2RX1P51575 399 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 NCBP2P52298 156 aaKnown RBP eCLIP9.84□□□□□ -0.83
HDAC6-233ENST00000489352 HEPACAMQ14CZ8 416 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 TBRG1Q3YBR2 411 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 OXLD1Q5BKU9 147 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 TSPO2Q5TGU0 170 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 FAM205BPQ63HN1 556 aa9.84□□□□□ -0.83
HDAC6-233ENST00000489352 FRG2Q64ET8 278 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms