RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 FGL1Q08830 312 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 ZNF154Q13106 437 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 DDX39BQ13838 428 aaKnown RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 GANABQ14697 944 aaKnown RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 CHI3L2Q15782 390 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 SYPL1Q16563 259 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 ZNF630Q2M218 657 aaPredicted RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 FAM74A3Q4VXF1 159 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 BOLA3Q53S33 107 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 CCDC183Q5T5S1 534 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 PYHIN1Q6K0P9 492 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 LANCL3Q6ZV70 420 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 IFNEQ86WN2 208 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 CLDN19Q8N6F1 224 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 BHLHE23Q8NDY6 225 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 STXBP6Q8NFX7 210 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 IL1F10Q8WWZ1 152 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 SRSF12Q8WXF0 261 aaKnown RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 EMG1Q92979 244 aaKnown RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 IL22RA2Q969J5 263 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 TUBGCP3Q96CW5 907 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 SLC41A3Q96GZ6 507 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 C7orf34Q96L11 122 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 PSKH2Q96QS6 385 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 SECISBP2Q96T21 854 aaKnown RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 CNPY3Q9BT09 278 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 GCOM2Q9BZD3 368 aaPredicted RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 POLR3FQ9H1D9 316 aaPredicted RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 GLIPR2Q9H4G4 154 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 MEAF6Q9HAF1 191 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 PIPOXQ9P0Z9 390 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 SPRR3Q9UBC9 169 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 GNG12Q9UBI6 72 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 CTNNA3Q9UI47 895 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 ANAPC7Q9UJX3 599 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 CLEC4AQ9UMR7 237 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 USP16Q9Y5T5 823 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 KANK1Q14678 1352 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 FAM240BA0A1B0GVZ2 78 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 DHRS7CA6NNS2 312 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 NPIPA7E9PJI5 369 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 ARPC3O15145 178 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 STX7O15400 261 aaKnown RBP2.26□□□□□ -2.05
RFC4-213ENST00000489028 ZNF208O43345 1280 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 IL1BP01584 269 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 HPNP05981 417 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 HBQ1P09105 142 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 HSMCR30P0CW71 290 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 NPIPA8P0DM63 369 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 PGCP20142 388 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 TPSB2P20231 275 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 UQCRC2P22695 453 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 AP3M2P53677 418 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 ATP5IP56385 69 aaPredicted RBP2.26□□□□□ -2.05
RFC4-213ENST00000489028 TNFRSF17Q02223 184 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 OC90Q02509 493 aaPredicted RBP2.26□□□□□ -2.05
RFC4-213ENST00000489028 MAP2K1Q02750 393 aaPredicted RBP2.26□□□□□ -2.05
RFC4-213ENST00000489028 RGS1Q08116 209 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 DAZ2Q13117 558 aaKnown RBP2.26□□□□□ -2.05
RFC4-213ENST00000489028 ORC2Q13416 577 aaPredicted RBP2.26□□□□□ -2.05
RFC4-213ENST00000489028 TPSAB1Q15661 275 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 TEX44Q53QW1 395 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 OR5M10Q6IEU7 315 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 OR8G2PQ6IF36 304 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 SYT10Q6XYQ8 523 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 TAS2R42Q7RTR8 314 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 EFL1Q7Z2Z2 1120 aaKnown RBP2.26□□□□□ -2.05
RFC4-213ENST00000489028 KIAA1328Q86T90 577 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 LRRC43Q8N309 656 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 BPIFB2Q8N4F0 458 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 CCDC71LQ8N9Z2 235 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 OR10A7Q8NGE5 316 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 OR9A4Q8NGU2 314 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 SH3YL1Q96HL8 342 aaPredicted RBP2.26□□□□□ -2.05
RFC4-213ENST00000489028 TPD52L3Q96J77 140 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 PLIN2Q99541 437 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 NICN1Q9BSH3 213 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 TUBGCP2Q9BSJ2 902 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 DUSP16Q9BY84 665 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 RHOJQ9H4E5 214 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 DAZ3Q9NR90 486 aaKnown RBP2.26□□□□□ -2.05
RFC4-213ENST00000489028 UTP6Q9NYH9 597 aaKnown RBP2.26□□□□□ -2.05
RFC4-213ENST00000489028 NPIPA1Q9UND3 350 aa2.26□□□□□ -2.05
RFC4-213ENST00000489028 METTL21EPA6NDL7 271 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 TUBAL3A6NHL2 446 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 OR6C65A6NJZ3 312 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 TRIM49D1C9J1S8 452 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 BTN3A3O00478 584 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 PRRG1O14668 218 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 B4GALT2O60909 372 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 GPX5O75715 221 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 CABYRO75952 493 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 B3GAT3O94766 335 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 LRATO95237 230 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 IGF1P05019 195 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 H2BFMP0C1H6 154 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 XRCC1P18887 633 aaPredicted RBP2.25□□□□□ -2.05
RFC4-213ENST00000489028 VDAC1P21796 283 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 GRIA1P42261 906 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 DHPSP49366 369 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms