RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 MRGPRX4Q96LA9 322 aa11.15□□□□□ -0.62
TRAIP-209ENST00000488860 ZNF347Q96SE7 839 aa11.15□□□□□ -0.62
TRAIP-209ENST00000488860 PIP5K1AQ99755 562 aa11.15□□□□□ -0.62
TRAIP-209ENST00000488860 PIGQQ9BRB3 760 aa11.15□□□□□ -0.62
TRAIP-209ENST00000488860 POLR2J2Q9GZM3 115 aaKnown RBP11.15□□□□□ -0.62
TRAIP-209ENST00000488860 POLR2J3Q9H1A7 115 aaKnown RBP11.15□□□□□ -0.62
TRAIP-209ENST00000488860 ZDHHC11Q9H8X9 412 aa11.15□□□□□ -0.62
TRAIP-209ENST00000488860 RIMS3Q9UJD0 308 aa11.15□□□□□ -0.62
TRAIP-209ENST00000488860 TMED7Q9Y3B3 224 aa11.15□□□□□ -0.62
TRAIP-209ENST00000488860 AP4S1Q9Y587 144 aa11.15□□□□□ -0.62
TRAIP-209ENST00000488860 TRGV5A0A0B4J1U4 118 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 TTLL8A6PVC2 850 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 GNGT2O14610 69 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 FFAR1O14842 300 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 CHP2O43745 196 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 SUSD5O60279 629 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 ZIC3O60481 467 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 NTN1O95631 604 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 H1F0P07305 194 aaKnown RBP11.14□□□□□ -0.63
TRAIP-209ENST00000488860 POU3F2P20265 443 aaPredicted RBP11.14□□□□□ -0.63
TRAIP-209ENST00000488860 IL11P20809 199 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 CXCR1P25024 350 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 EIF1P41567 113 aaKnown RBP11.14□□□□□ -0.63
TRAIP-209ENST00000488860 HTR3AP46098 478 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 ELF3P78545 371 aaPredicted RBP11.14□□□□□ -0.63
TRAIP-209ENST00000488860 HSF1Q00613 529 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 ST3GAL3Q11203 375 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 SELENBP1Q13228 472 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 SLC25A53Q5H9E4 307 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 C3orf33Q6P1S2 294 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 ZFP1Q6P2D0 407 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 ULK3Q6PHR2 472 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 ATG4DQ86TL0 474 aaPredicted RBP11.14□□□□□ -0.63
TRAIP-209ENST00000488860 C10orf67Q8IYJ2 551 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 GTPBP8Q8N3Z3 284 aaPredicted RBP11.14□□□□□ -0.63
TRAIP-209ENST00000488860 OR52J3Q8NH60 311 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 DNAJA4Q8WW22 397 aaPredicted RBP11.14□□□□□ -0.63
TRAIP-209ENST00000488860 NR4A3Q92570 626 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 SNRNP40Q96DI7 357 aaKnown RBP11.14□□□□□ -0.63
TRAIP-209ENST00000488860 DNAJA3Q96EY1 480 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 S100A14Q9HCY8 104 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 SERINC1Q9NRX5 453 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 OSGIN1Q9UJX0 560 aa11.14□□□□□ -0.63
TRAIP-209ENST00000488860 RRP15Q9Y3B9 282 aaKnown RBP11.14□□□□□ -0.63
TRAIP-209ENST00000488860 SVILO95425 2214 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 TMEM72A0PK05 275 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 C7orf72A4D263 438 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 H0Y3Z8 333 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 KPNA4O00629 521 aaPredicted RBP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 ADAMDEC1O15204 470 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 SEC14L5O43304 696 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 HNRNPRO43390 633 aaKnown RBP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 PRSS23O95084 383 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 GADD45GO95257 159 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 BAG2O95816 211 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 OPN1LWP04000 364 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 THY1P04216 161 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 TFPIP10646 304 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 PNMTP11086 282 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 HOXB6P17509 224 aaKnown RBP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 FUT4P22083 530 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 ELK4P28324 431 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 SFTPDP35247 375 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 APOBEC1P41238 236 aaKnown RBP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 B3GALT5-AS1P59052 145 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 PPP1R8Q12972 351 aaKnown RBP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 TRAM2Q15035 370 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 GLYR1Q49A26 553 aaPredicted RBP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 IQCCQ4KMZ1 466 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 OR2T5Q6IEZ7 315 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 AAGABQ6PD74 315 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 WDR88Q6ZMY6 472 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 TRILQ7L0X0 811 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 PIWIL3Q7Z3Z3 882 aaKnown RBP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 ZNF605Q86T29 641 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 P3H2Q8IVL5 708 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 NKAIN4Q8IVV8 208 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 SIAH3Q8IW03 269 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 UBQLNLQ8IYU4 475 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 PAPD5Q8NDF8 572 aaKnown RBP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 OR2T29Q8NH02 315 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 NEIL3Q8TAT5 605 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 TMEM255BQ8WV15 326 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 LRTOMTQ8WZ04 291 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 DUS3LQ96G46 650 aaKnown RBP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 ADAM19Q9H013 955 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 REEP1Q9H902 201 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 ACKR4Q9NPB9 350 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 ARMC1Q9NVT9 282 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 TNFRSF10DQ9UBN6 386 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 CHRNA9Q9UGM1 479 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 ACAD8Q9UKU7 415 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 MRPS18CQ9Y3D5 142 aaKnown RBP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 SAMHD1Q9Y3Z3 626 aaKnown RBP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 SPIN1Q9Y657 262 aaPredicted RBP11.13□□□□□ -0.63
TRAIP-209ENST00000488860 U3KQV3 271 aa11.13□□□□□ -0.63
TRAIP-209ENST00000488860 ATRXP46100 2492 aa11.12□□□□□ -0.63
TRAIP-209ENST00000488860 H3BNX3 289 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms