RNA–Protein interactions for RNA: ENST00000488403.5

NOP58-208, Transcript of NOP58 ribonucleoprotein, human

TSL 2

Gene NOP58, Length 871 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP58-208	ENST00000488403	SLC39A3	Q9BRY0	314 aa		13.22	□□□□□ -0.29
NOP58-208	ENST00000488403	CCDC106	Q9BWC9	280 aa		13.22	□□□□□ -0.29
NOP58-208	ENST00000488403	SPATA9	Q9BWV2	254 aa		13.22	□□□□□ -0.29
NOP58-208	ENST00000488403	PINK1	Q9BXM7	581 aa		13.22	□□□□□ -0.29
NOP58-208	ENST00000488403	KAT8	Q9H7Z6	458 aa	Known RBP	13.22	□□□□□ -0.29
NOP58-208	ENST00000488403	NANOG	Q9H9S0	305 aa		13.22	□□□□□ -0.29
NOP58-208	ENST00000488403	SLC24A3	Q9HC58	644 aa		13.22	□□□□□ -0.29
NOP58-208	ENST00000488403	DNAJB12	Q9NXW2	375 aa	Known RBP	13.22	□□□□□ -0.29
NOP58-208	ENST00000488403	ARL2BP	Q9Y2Y0	163 aa		13.22	□□□□□ -0.29
NOP58-208	ENST00000488403	C2CD3	Q4AC94	2353 aa		13.22	□□□□□ -0.29
NOP58-208	ENST00000488403	MED12	Q93074	2177 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	CDHR4	A6H8M9	788 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	PRORSD1P	A6NEY8	169 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	SLC22A20	A6NK97	555 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403		H0YC42	278 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	SYT5	O00445	386 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	SERPINB7	O75635	380 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	SYNGR4	O95473	234 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	NTN1	O95631	604 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	PABPC4L	P0CB38	370 aa	Known RBP	13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	TMIGD3	P0DMS9	266 aa	Predicted RBP	13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	DNAJA1	P31689	397 aa	Known RBP	13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	SFTPD	P35247	375 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	KIR2DL3	P43628	341 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	IDH2	P48735	452 aa	Known RBP	13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	AGFG1	P52594	562 aa	Known RBP	13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	ART1	P52961	327 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	TPD52	P55327	224 aa	Predicted RBP	13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	EEF1A1	P68104	462 aa	Known RBP	13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	SELENBP1	Q13228	472 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	SELPLG	Q14242	412 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	ADRM1	Q16186	407 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	RNF220	Q5VTB9	566 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	HBM	Q6B0K9	141 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	PPP4R4	Q6NUP7	873 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	ZNF836	Q6ZNA1	936 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	ADGRE4P	Q86SQ3	457 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	SERPINA11	Q86U17	422 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	GGN	Q86UU5	652 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	C9orf106	Q8NAJ2	232 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	RELL2	Q8NC24	303 aa	Predicted RBP	13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	OR10A6	Q8NH74	314 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	OR2V1	Q8NHB1	315 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	CMTM5	Q96DZ9	223 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	ZFP3	Q96NJ6	502 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	PRRG4	Q9BZD6	226 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	EFCAB1	Q9HAE3	211 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	TIGAR	Q9NQ88	270 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	RLIM	Q9NVW2	624 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	CLCF1	Q9UBD9	225 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	SLC13A4	Q9UKG4	626 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	PRDM4	Q9UKN5	801 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	ZNF175	Q9Y473	711 aa		13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	SPIN1	Q9Y657	262 aa	Predicted RBP	13.21	□□□□□ -0.29
NOP58-208	ENST00000488403	ETV2	O00321	342 aa	Predicted RBP	13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	AP3D1	O14617	1153 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	DVL2	O14641	736 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	TNFSF11	O14788	317 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	AIM2	O14862	343 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	CTAG2	O75638	210 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	IL11	P20809	199 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	CTSS	P25774	331 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	AQP1	P29972	269 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	SLC7A1	P30825	629 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	APOBEC1	P41238	236 aa	Known RBP	13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	HTR3A	P46098	478 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	CARD18	P57730	90 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	COPZ1	P61923	177 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	RABL3	Q5HYI8	236 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	INTS11	Q5TA45	600 aa	Known RBP	13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	EEF1A1P5	Q5VTE0	462 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	OR2A2	Q6IF42	318 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	C3orf33	Q6P1S2	294 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	POMZP3	Q6PJE2	187 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	PLEKHM3	Q6ZWE6	761 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	GRINA	Q7Z429	371 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	NET1	Q7Z628	596 aa	Predicted RBP	13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	PIGW	Q7Z7B1	504 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	PTOV1	Q86YD1	416 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	CLIP4	Q8N3C7	705 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	OR10D3	Q8NH80	312 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	OSTF1	Q92882	214 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	GPATCH1	Q9BRR8	931 aa	Known RBP	13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	MYLK2	Q9H1R3	596 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	LIME1	Q9H400	295 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	PIF1	Q9H611	641 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	CRIM1	Q9NZV1	1036 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	MCTS1	Q9ULC4	181 aa	Known RBP	13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	AP3M1	Q9Y2T2	418 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	MPDZ	O75970	2070 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403	KIAA1549	Q9HCM3	1950 aa		13.2	□□□□□ -0.3
NOP58-208	ENST00000488403		A0A0J9YW62	118 aa		13.19	□□□□□ -0.3
NOP58-208	ENST00000488403	FXYD1	O00168	92 aa		13.19	□□□□□ -0.3
NOP58-208	ENST00000488403	FAAH	O00519	579 aa		13.19	□□□□□ -0.3
NOP58-208	ENST00000488403	ADAMDEC1	O15204	470 aa		13.19	□□□□□ -0.3
NOP58-208	ENST00000488403	CXCL13	O43927	109 aa		13.19	□□□□□ -0.3
NOP58-208	ENST00000488403	DCTN3	O75935	186 aa		13.19	□□□□□ -0.3
NOP58-208	ENST00000488403	RCBTB2	O95199	551 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms