RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CTU2Q2VPK5 515 aaKnown RBP9.95□□□□□ -0.82
UBE4B-210ENST00000488228 SAMD4BQ5PRF9 694 aaKnown RBP9.95□□□□□ -0.82
UBE4B-210ENST00000488228 C3orf33Q6P1S2 294 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 RPTNQ6XPR3 784 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 GRINAQ7Z429 371 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 RBM45Q8IUH3 476 aaKnown RBP9.95□□□□□ -0.82
UBE4B-210ENST00000488228 PM20D2Q8IYS1 436 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 MEIOBQ8N635 442 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 FAM162AQ96A26 154 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 DNAJA3Q96EY1 480 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 CCDC120Q96HB5 630 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 ZNF845Q96IR2 970 aaPredicted RBP9.95□□□□□ -0.82
UBE4B-210ENST00000488228 TPD52L3Q96J77 140 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 TRIB1Q96RU8 372 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 DMRTA2Q96SC8 542 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 OR11A1Q9GZK7 315 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 KLHL28Q9NXS3 571 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 TESQ9UGI8 421 aaKnown RBP9.95□□□□□ -0.82
UBE4B-210ENST00000488228 MEMO1Q9Y316 297 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 AP4B1Q9Y6B7 739 aa9.95□□□□□ -0.82
UBE4B-210ENST00000488228 TMED7-TICAM2A0A0A6YYA0 188 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 A0A1B0GUH1 482 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 A0A1B0GWA3 101 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 LINC01387J3KSC0 135 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 TNFSF11O14788 317 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 ARPC2O15144 300 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 AGFG2O95081 481 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 ZNF682O95780 498 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 LGI1O95970 557 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 SERPINA1P01009 418 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 CPN1P15169 458 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 PTNP21246 168 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 ADH6P28332 368 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 KDELR2P33947 212 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 SLC1A3P43003 542 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 EIF1AXP47813 144 aaKnown RBP9.94□□□□□ -0.82
UBE4B-210ENST00000488228 DLX5P56178 289 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 NUP107P57740 925 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 COPZ1P61923 177 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 ADORA2A-AS1P86434 159 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 KCNC4Q03721 635 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 WBP2NLQ6ICG8 309 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 PPP4R4Q6NUP7 873 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 B3GNT6Q6ZMB0 384 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 VTCN1Q7Z7D3 282 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 TSPYL5Q86VY4 417 aaPredicted RBP9.94□□□□□ -0.82
UBE4B-210ENST00000488228 CARM1Q86X55 608 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 LILRA2Q8N149 483 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 BHLHE22Q8NFJ8 381 aaPredicted RBP9.94□□□□□ -0.82
UBE4B-210ENST00000488228 TNIP2Q8NFZ5 429 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 OR52E4Q8NGH9 312 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 OR6T1Q8NGN1 323 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 PROX1Q92786 737 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 SLC35B4Q969S0 331 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 C3orf49Q96BT1 292 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 CCDC124Q96CT7 223 aaKnown RBP9.94□□□□□ -0.82
UBE4B-210ENST00000488228 HSH2DQ96JZ2 352 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 ADGRG7Q96K78 797 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 CLPTM1LQ96KA5 538 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 KLHL15Q96M94 604 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 COQ10BQ9H8M1 238 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 TAS2R1Q9NYW7 299 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 CLCF1Q9UBD9 225 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 CHRNA9Q9UGM1 479 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 CD300AQ9UGN4 299 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 OSGIN1Q9UJX0 560 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 SLC5A6Q9Y289 635 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 TMED7Q9Y3B3 224 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 V9GYQ6 96 aa9.94□□□□□ -0.82
UBE4B-210ENST00000488228 ICE1Q9Y2F5 2266 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 A0A0J9YW62 118 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 A0A1W2PNR3 127 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 TMEM72A0PK05 275 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 CPSF4LA6NMK7 179 aaKnown RBP9.93□□□□□ -0.82
UBE4B-210ENST00000488228 E9PLN8 166 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 CXCL13O43927 109 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 TPST2O60704 377 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 ZG16O60844 167 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 IFNA14P01570 189 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 GLI4P10075 376 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 GABRA1P14867 456 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 ATP6V1B2P21281 511 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 HTR1EP28566 365 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 OR1E2P47887 323 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 POLR2HP52434 150 aaKnown RBP9.93□□□□□ -0.82
UBE4B-210ENST00000488228 RAC1P63000 192 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 BNIP2Q12982 314 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 BCL2A1Q16548 175 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 FXNQ16595 210 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 TMEM176BQ3YBM2 270 aaPredicted RBP9.93□□□□□ -0.82
UBE4B-210ENST00000488228 SYT14P1Q58G82 188 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 C6orf89Q6UWU4 347 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 DEF8Q6ZN54 512 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 SEM1Q6ZVN7 128 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 RANBP3LQ86VV4 465 aaPredicted RBP9.93□□□□□ -0.82
UBE4B-210ENST00000488228 ADGRG3Q86Y34 549 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 FAM86B1Q8N7N1 296 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 OR10D3Q8NH80 312 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 OR2V1Q8NHB1 315 aa9.93□□□□□ -0.82
UBE4B-210ENST00000488228 RASSF5Q8WWW0 418 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms