RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 TNFAIP8L2Q6P589 184 aaPredicted RBP10.79□□□□□ -0.68
VPS16-208ENST00000487461 DNAJC14Q6Y2X3 702 aaPredicted RBP10.79□□□□□ -0.68
VPS16-208ENST00000487461 EIF3MQ7L2H7 374 aaKnown RBP10.79□□□□□ -0.68
VPS16-208ENST00000487461 C16orf62Q7Z3J2 963 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 HMGN2P46Q86SG4 172 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 KBTBD8Q8NFY9 601 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 TMEM234Q8WY98 164 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 FBXW5Q969U6 566 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 SORT1Q99523 831 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 MDFIQ99750 246 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 CCDC106Q9BWC9 280 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 DPY30Q9C005 99 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 TRIM2Q9C040 744 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 SAP130Q9H0E3 1048 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 CTPS2Q9NRF8 586 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 EXD2Q9NVH0 621 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 LIPT1Q9Y234 373 aa10.79□□□□□ -0.68
VPS16-208ENST00000487461 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.79□□□□□ -0.68
VPS16-208ENST00000487461 MAGED1Q9Y5V3 778 aaPredicted RBP10.79□□□□□ -0.68
VPS16-208ENST00000487461 FBN3Q75N90 2809 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 RNF223E7ERA6 249 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 SULT2B1O00204 365 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 BIRC5O15392 142 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 KIAA0513O60268 411 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 PGM3O95394 542 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 CD8AP01732 235 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 FESP07332 822 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 GUSBP08236 651 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 MYZAPP0CAP1 466 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 NTF4P34130 210 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 RYKP34925 604 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 CDKN1AP38936 164 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 APOBEC1P41238 236 aaKnown RBP10.78□□□□□ -0.68
VPS16-208ENST00000487461 RPL14P50914 215 aaKnown RBP10.78□□□□□ -0.68
VPS16-208ENST00000487461 PPP2R2BQ00005 443 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 KRTAP1-1Q07627 177 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 FUT5Q11128 374 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 FAPQ12884 760 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 CASP8Q14790 479 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 PPA1Q15181 289 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 STK11Q15831 433 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 SYT14P1Q58G82 188 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 ATAD3BQ5T9A4 648 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 ANXA8L1Q5VT79 327 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 EMBQ6PCB8 327 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 FRRS1Q6ZNA5 592 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 GALNT5Q7Z7M9 940 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 MTDHQ86UE4 582 aaKnown RBP10.78□□□□□ -0.68
VPS16-208ENST00000487461 LSRQ86X29 649 aaPredicted RBP10.78□□□□□ -0.68
VPS16-208ENST00000487461 ADGRG3Q86Y34 549 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 ZNF100Q8IYN0 542 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 ZNF433Q8N7K0 673 aaPredicted RBP10.78□□□□□ -0.68
VPS16-208ENST00000487461 MAPK1IP1LQ8NDC0 245 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 FAM71CQ8NEG0 241 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 TESCQ96BS2 214 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 ROPN1LQ96C74 230 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 DNAJA3Q96EY1 480 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 TRMT61AQ96FX7 289 aaKnown RBP10.78□□□□□ -0.68
VPS16-208ENST00000487461 ARL5BQ96KC2 179 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 CISD1Q9NZ45 108 aaKnown RBP10.78□□□□□ -0.68
VPS16-208ENST00000487461 RAP2CQ9Y3L5 183 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 WDR45Q9Y484 360 aa10.78□□□□□ -0.68
VPS16-208ENST00000487461 ALPK2Q86TB3 2170 aa10.77□□□□□ -0.68
VPS16-208ENST00000487461 IGKV3D-15A0A087WSY6 115 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 CLDN24A6NM45 220 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 SHISA9B4DS77 424 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 ADAM11O75078 769 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 NDUFS7O75251 213 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 AGR2O95994 175 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 IGHV3-9P01782 118 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 THBS1P07996 1170 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 DHRS4L1P0CG22 281 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 TFPIP10646 304 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 GGT1P19440 569 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 COX5AP20674 150 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 IDUAP35475 653 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 ACVR1BP36896 505 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 SLC1A6P48664 564 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 CSNK2A1P68400 391 aaPredicted RBP10.77□□□□□ -0.69
VPS16-208ENST00000487461 PLAURQ03405 335 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 CHRNEQ04844 493 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 VEZF1Q14119 521 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 MPP2Q14168 576 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 PDK3Q15120 406 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 SPANXN4Q5MJ08 99 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 TIMM23BQ5SRD1 257 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 ABLIM2Q6H8Q1 611 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 WDR93Q6P2C0 686 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 VPS37AQ8NEZ2 397 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 ZNF563Q8TA94 476 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 GTPBP3Q969Y2 492 aaKnown RBP10.77□□□□□ -0.69
VPS16-208ENST00000487461 MUCL1Q96DR8 90 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 NEURL3Q96EH8 262 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 TEX37Q96LM6 180 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 REG4Q9BYZ8 158 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 NUF2Q9BZD4 464 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 OR11A1Q9GZK7 315 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 POLE3Q9NRF9 147 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 PNPOQ9NVS9 261 aa10.77□□□□□ -0.69
VPS16-208ENST00000487461 NPAP1Q9NZP6 1156 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms