RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 SHC1P29353 583 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 KCNJ5P48544 419 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 CARD18P57730 90 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 NCALDP61601 193 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 KLF10Q13118 480 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 SNTB1Q13884 538 aaKnown RBP9.17□□□□□ -0.94
NEK4-204ENST00000487068 CTU2Q2VPK5 515 aaKnown RBP9.17□□□□□ -0.94
NEK4-204ENST00000487068 TRMT5Q32P41 509 aaKnown RBP9.17□□□□□ -0.94
NEK4-204ENST00000487068 DMRTA1Q5VZB9 504 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 REP15Q6BDI9 236 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 REEP3Q6NUK4 255 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 VWA1Q6PCB0 445 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 PLEKHM3Q6ZWE6 761 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 GRINAQ7Z429 371 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 SPATA21Q7Z572 469 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 CPLX4Q7Z7G2 160 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 ADGRE4PQ86SQ3 457 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 PCYOX1LQ8NBM8 494 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 FAM71CQ8NEG0 241 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 TSPEARQ8WU66 669 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 C10orf82Q8WW14 230 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 PMM1Q92871 262 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 OSTF1Q92882 214 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 CPNE4Q96A23 557 aaPredicted RBP9.17□□□□□ -0.94
NEK4-204ENST00000487068 ANKRD27Q96NW4 1050 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 ZNF607Q96SK3 696 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 ELAC2Q9BQ52 826 aaKnown RBP9.17□□□□□ -0.94
NEK4-204ENST00000487068 SPATA5L1Q9BVQ7 753 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 IKZF5Q9H5V7 419 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 SLC52A3Q9NQ40 469 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 SAR1AQ9NR31 198 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 CTPS2Q9NRF8 586 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 RLIMQ9NVW2 624 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 PACSIN3Q9UKS6 424 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 IFT52Q9Y366 437 aa9.17□□□□□ -0.94
NEK4-204ENST00000487068 LOC100653049A0A140TA62 436 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 CCDC22O60826 627 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 KRT34O76011 436 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 AQP8O94778 261 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 PGM3O95394 542 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 IL18BPO95998 194 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 THBS1P07996 1170 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 BMP2P12643 396 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 SEC24CP53992 1094 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 GYS2P54840 703 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 TFF3Q07654 80 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 CYLC2Q14093 348 aaPredicted RBP9.16□□□□□ -0.94
NEK4-204ENST00000487068 ZNF239Q16600 458 aaKnown RBP9.16□□□□□ -0.94
NEK4-204ENST00000487068 SYT14P1Q58G82 188 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 RUNDC3AQ59EK9 446 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 RNF220Q5VTB9 566 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 PRAMEF8Q5VWM4 474 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 PRAMEF7Q5VXH5 474 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 FBXW10Q5XX13 1052 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 DLEU7Q6UYE1 221 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 ZNF550Q7Z398 422 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 DEPDC4Q8N2C3 294 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 C10orf111Q8N326 155 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 DPP10Q8N608 796 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 POU5F2Q8N7G0 328 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 C11orf65Q8NCR3 313 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 HIPK4Q8NE63 616 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 RNF217Q8TC41 542 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 SLC26A7Q8TE54 656 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 SLC25A43Q8WUT9 341 aaPredicted RBP9.16□□□□□ -0.94
NEK4-204ENST00000487068 ROBO4Q8WZ75 1007 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 RNASE6Q93091 150 aaKnown RBP9.16□□□□□ -0.94
NEK4-204ENST00000487068 ZHX1-C8orf76Q96EF9 292 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 ZNF317Q96PQ6 595 aaPredicted RBP9.16□□□□□ -0.94
NEK4-204ENST00000487068 SLC39A3Q9BRY0 314 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 SPATA9Q9BWV2 254 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 RBM24Q9BX46 236 aaKnown RBP9.16□□□□□ -0.94
NEK4-204ENST00000487068 PIGMQ9H3S5 423 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 PIF1Q9H611 641 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 C12orf49Q9H741 205 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 RNF122Q9H9V4 155 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 ACER3Q9NUN7 267 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 RPS6KB2Q9UBS0 482 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 CHRNA9Q9UGM1 479 aa9.16□□□□□ -0.94
NEK4-204ENST00000487068 FOXD3Q9UJU5 478 aaPredicted RBP9.16□□□□□ -0.94
NEK4-204ENST00000487068 OTOGQ6ZRI0 2925 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 F8P00451 2351 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 TRBV5-3A0A0A0MS03 114 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 TMED7-TICAM2A0A0A6YYA0 188 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 IGHV3-15A0A0B4J1V0 119 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 CDHR4A6H8M9 788 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 SULT2B1O00204 365 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 FBP2O00757 339 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 FRS3O43559 492 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 SERPINB7O75635 380 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 CRHP06850 196 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 ETS2P15036 469 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 GPX2P18283 190 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 CXCR1P25024 350 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 TACR3P29371 465 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 LSP1P33241 339 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 APOBEC1P41238 236 aaKnown RBP9.15□□□□□ -0.94
NEK4-204ENST00000487068 HTR3AP46098 478 aa9.15□□□□□ -0.94
NEK4-204ENST00000487068 POLR2HP52434 150 aaKnown RBP9.15□□□□□ -0.94
NEK4-204ENST00000487068 EEF1A1P68104 462 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms