RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ZNF3P17036 446 aa18.68■□□□□ 0.58
HPS3-206ENST00000486530 EFNA3P52797 238 aa18.68■□□□□ 0.58
HPS3-206ENST00000486530 ARHGAP11AQ6P4F7 1023 aa18.68■□□□□ 0.58
HPS3-206ENST00000486530 LHFPL3Q86UP9 236 aa18.68■□□□□ 0.58
HPS3-206ENST00000486530 C3orf49Q96BT1 292 aa18.68■□□□□ 0.58
HPS3-206ENST00000486530 SECISBP2Q96T21 854 aaKnown RBP18.68■□□□□ 0.58
HPS3-206ENST00000486530 NUDT9Q9BW91 350 aa18.68■□□□□ 0.58
HPS3-206ENST00000486530 SLC19A3Q9BZV2 496 aa18.68■□□□□ 0.58
HPS3-206ENST00000486530 ERVK13-1Q9NX77 482 aa18.68■□□□□ 0.58
HPS3-206ENST00000486530 C2orf92A0A1B0GVN3 265 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 SLC22A31A6NKX4 558 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 J3QRE1 110 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 ANKRD34CP0C6C1 535 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 CD40LGP29965 261 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 SLC9A3P48764 834 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 ACY1Q03154 408 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 ACSM1Q08AH1 577 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 FHL1Q13642 323 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 EBPQ15125 230 aaKnown RBP18.67■□□□□ 0.58
HPS3-206ENST00000486530 SIRT6Q8N6T7 355 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 DTWD2Q8NBA8 298 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 OR51G2Q8NGK0 314 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 NACC2Q96BF6 587 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 TRMT61AQ96FX7 289 aaKnown RBP18.67■□□□□ 0.58
HPS3-206ENST00000486530 TNFRSF13CQ96RJ3 184 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 GAL3ST4Q96RP7 486 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 ZNF649Q9BS31 505 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 VN1R1Q9GZP7 353 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 COPS7AQ9UBW8 275 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 HTR3EA5X5Y0 456 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 PRKNO60260 465 aaPredicted RBP18.67■□□□□ 0.58
HPS3-206ENST00000486530 PPP1R3DO95685 299 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 IFNGP01579 166 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 PEPDP12955 493 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 HK1P19367 917 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 PPP5CP53041 499 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 SKP2Q13309 424 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 CD226Q15762 336 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 WBP2NLQ6ICG8 309 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 RHBDD2Q6NTF9 364 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 GUSBP11Q6P575 273 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 DCDC5Q6ZRR9 648 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 SLC37A3Q8NCC5 494 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 PHOSPHO1Q8TCT1 267 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 LRFN5Q96NI6 719 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 MED20Q9H944 212 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 MKL2Q9ULH7 1088 aa18.67■□□□□ 0.58
HPS3-206ENST00000486530 ATXN7L1Q9ULK2 861 aaPredicted RBP18.67■□□□□ 0.58
HPS3-206ENST00000486530 A0A075B6Q4 140 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 LY6G6EA0A0G2JKS1 128 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 CPED1A4D0V7 1026 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 AKAP8O43823 692 aaKnown RBP18.66■□□□□ 0.58
HPS3-206ENST00000486530 NDUFB2O95178 105 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 GABRA5P31644 462 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 HLA-DQA1Q5Y7H0 255 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 RABEPKQ7Z6M1 372 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 C9orf40Q8IXQ3 194 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 CENPSQ8N2Z9 138 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 GATSQ8NAP1 163 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 PLPP5Q8NEB5 264 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 KISS1RQ969F8 398 aaPredicted RBP18.66■□□□□ 0.58
HPS3-206ENST00000486530 SLC7A5P2Q9GIP4 190 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 NUAK2Q9H093 628 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 FAIMQ9NVQ4 179 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 TXNL4BQ9NX01 149 aaKnown RBP18.66■□□□□ 0.58
HPS3-206ENST00000486530 FBXO4Q9UKT5 387 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 SF3B6Q9Y3B4 125 aaKnown RBP18.66■□□□□ 0.58
HPS3-206ENST00000486530 U3KQA8 63 aa18.66■□□□□ 0.58
HPS3-206ENST00000486530 OR6C76A6NM76 312 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 GNB5O14775 395 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 SLC30A4O14863 429 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 TO15178 435 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 YKT6O15498 198 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 ZNF264O43296 627 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 PNMTP11086 282 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 NOS3P29474 1203 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 CD79BP40259 229 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 ATP1A4Q13733 1029 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 PERM1Q5SV97 790 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 ZNF574Q6ZN55 896 aaPredicted RBP18.65■□□□□ 0.58
HPS3-206ENST00000486530 TMPRSS9Q7Z410 1059 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 PRSS58Q8IYP2 241 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 ACBD7Q8N6N7 88 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 OR1N1Q8NGS0 311 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 COX4I2Q96KJ9 171 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 HCAR1Q9BXC0 346 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 TGIF2Q9GZN2 237 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 TBCCD1Q9NVR7 557 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 CRNNQ9UBG3 495 aaPredicted RBP18.65■□□□□ 0.58
HPS3-206ENST00000486530 MUC3AQ02505 3323 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 GTPBP1O00178 669 aaKnown RBP18.65■□□□□ 0.58
HPS3-206ENST00000486530 IGF2P01344 180 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 IL12BP29460 328 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 RPS19P39019 145 aaKnown RBP18.65■□□□□ 0.58
HPS3-206ENST00000486530 ZNF45Q02386 682 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 KLHL12Q53G59 568 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 ZNF362Q5T0B9 420 aaPredicted RBP18.65■□□□□ 0.58
HPS3-206ENST00000486530 COX15Q7KZN9 410 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 SLC29A4Q7RTT9 530 aa18.65■□□□□ 0.58
HPS3-206ENST00000486530 FAM181AQ8N9Y4 354 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms