RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 KLHL9Q9P2J3 617 aa16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 SPIN1Q9Y657 262 aaPredicted RBP16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 ABCA4P78363 2273 aa16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 HRNRQ86YZ3 2850 aaPredicted RBP16.39■□□□□ 0.21
PRPF40A-209ENST00000486100 IGHV3-15A0A0B4J1V0 119 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 CYTIPO60759 359 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 ANP32DO95626 131 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 THBDP07204 575 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 CD53P19397 219 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 PSMB1P20618 241 aaKnown RBP16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 CSNK2A1P68400 391 aaPredicted RBP16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 PLAURQ03405 335 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 GNA13Q14344 377 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 SYT14P1Q58G82 188 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 TFAP2EQ6VUC0 442 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 GRINAQ7Z429 371 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 TGIF2LYQ8IUE0 185 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 OR9I1Q8NGQ6 314 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 PSD2Q9BQI7 771 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 TMUB1Q9BVT8 246 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 HDHD5Q9BXW7 423 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 TPT1P8Q9HAU6 139 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 CTPS2Q9NRF8 586 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 CHRNA9Q9UGM1 479 aa16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 ING1Q9UK53 422 aaPredicted RBP16.38■□□□□ 0.21
PRPF40A-209ENST00000486100 PRRC2AP48634 2157 aaKnown RBP16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 FAM234BA2RU67 622 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 SULT2B1O00204 365 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 SMAD9O15198 467 aaKnown RBP16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 ADAM11O75078 769 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 DBIP07108 87 aaKnown RBP16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 CD99P14209 185 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 IL7RP16871 459 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 RPS4Y1P22090 263 aaKnown RBP16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 LOXP28300 417 aaPredicted RBP16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 CRATP43155 626 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 IDH2P48735 452 aaKnown RBP16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 CLK1P49759 484 aaKnown RBP16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 DIO1P49895 249 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 RASGEF1BQ0VAM2 473 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 MAPK11Q15759 364 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 TTMPQ5BVD1 217 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 DNAJC14Q6Y2X3 702 aaPredicted RBP16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 ADGRG3Q86Y34 549 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 GABRG1Q8N1C3 465 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 STEAP2Q8NFT2 490 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 WDR60Q8WVS4 1066 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 VPS33AQ96AX1 596 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 ACTR6Q9GZN1 396 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 SLCO1B3Q9NPD5 702 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 P2RX2Q9UBL9 471 aa16.37■□□□□ 0.21
PRPF40A-209ENST00000486100 KLF4O43474 513 aa16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 GCM2O75603 506 aaPredicted RBP16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 TFPIP10646 304 aa16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 ETFAP13804 333 aa16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 HTR3AP46098 478 aa16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 MRPL19P49406 292 aaKnown RBP16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 GTDC1Q4AE62 458 aa16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 BEX5Q5H9J7 111 aa16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 MTDHQ86UE4 582 aaKnown RBP16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 CXorf67Q86X51 503 aaPredicted RBP16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 PEX5LQ8IYB4 626 aa16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 GTF2H4Q92759 462 aa16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 TCF7L2Q9NQB0 619 aa16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 BEX4Q9NWD9 120 aaPredicted RBP16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 THUMPD1Q9NXG2 353 aaKnown RBP16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 CALML5Q9NZT1 146 aa16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 HDGFL3Q9Y3E1 203 aa16.36■□□□□ 0.21
PRPF40A-209ENST00000486100 ZNF724A8MTY0 619 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 FAAHO00519 579 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 POLR3GO15318 223 aaPredicted RBP16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 TFPTP0C1Z6 253 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 KLK2P20151 261 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 IDH3AP50213 366 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 DSTNP60981 165 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 STX1BP61266 288 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 PPP2R2AP63151 447 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 ADAM8P78325 824 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 ACKR1Q16570 336 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 C6orf10Q5SRN2 563 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 SFRP5Q5T4F7 317 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 HDXQ7Z353 690 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 ARL5BQ96KC2 179 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 HS3ST6Q96QI5 342 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 CCDC28BQ9BUN5 200 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 PRDM4Q9UKN5 801 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 PCDHB14Q9Y5E9 798 aa16.35■□□□□ 0.21
PRPF40A-209ENST00000486100 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.34■□□□□ 0.21
PRPF40A-209ENST00000486100 CFAP73A6NFT4 308 aa16.34■□□□□ 0.21
PRPF40A-209ENST00000486100 ZNF814B7Z6K7 855 aa16.34■□□□□ 0.21
PRPF40A-209ENST00000486100 AP3D1O14617 1153 aa16.34■□□□□ 0.21
PRPF40A-209ENST00000486100 PMS2P2O95744 297 aa16.34■□□□□ 0.21
PRPF40A-209ENST00000486100 ADAP00813 363 aa16.34■□□□□ 0.21
PRPF40A-209ENST00000486100 FESP07332 822 aa16.34■□□□□ 0.21
PRPF40A-209ENST00000486100 FPR1P21462 350 aa16.34■□□□□ 0.21
PRPF40A-209ENST00000486100 SLC1A3P43003 542 aa16.34■□□□□ 0.21
PRPF40A-209ENST00000486100 OR3A2P47893 321 aa16.34■□□□□ 0.21
PRPF40A-209ENST00000486100 CRISP3P54108 245 aa16.34■□□□□ 0.21
PRPF40A-209ENST00000486100 EPS8Q12929 822 aa16.34■□□□□ 0.21
PRPF40A-209ENST00000486100 P2RY6Q15077 328 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms