RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 CSNK2A1P68400 391 aaPredicted RBP11.2□□□□□ -0.62
PTCD1-205ENST00000485746 CDK6Q00534 326 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 SORDQ00796 357 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 RNPS1Q15287 305 aaKnown RBP11.2□□□□□ -0.62
PTCD1-205ENST00000485746 ZNF239Q16600 458 aaKnown RBP11.2□□□□□ -0.62
PTCD1-205ENST00000485746 PRAMEF8Q5VWM4 474 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 PRAMEF7Q5VXH5 474 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 STK32CQ86UX6 486 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 SLC43A2Q8N370 569 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 ZNF610Q8N9Z0 462 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 OR6K3Q8NGY3 331 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 TSPEARQ8WU66 669 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 SLC25A43Q8WUT9 341 aaPredicted RBP11.2□□□□□ -0.62
PTCD1-205ENST00000485746 ZNF524Q96C55 264 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 DDIT4LQ96D03 193 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 ZHX1-C8orf76Q96EF9 292 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 LURAP1Q96LR2 239 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 SPATA5L1Q9BVQ7 753 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 SPATA9Q9BWV2 254 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 SRXN1Q9BYN0 137 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 KLHL4Q9C0H6 718 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 C12orf49Q9H741 205 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 SLC52A3Q9NQ40 469 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 RLIMQ9NVW2 624 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 CHRNA9Q9UGM1 479 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 SLC13A4Q9UKG4 626 aa11.2□□□□□ -0.62
PTCD1-205ENST00000485746 NUP214P35658 2090 aaPredicted RBP11.2□□□□□ -0.62
PTCD1-205ENST00000485746 SPTAN1Q13813 2472 aaKnown RBP11.19□□□□□ -0.62
PTCD1-205ENST00000485746 TMED7-TICAM2A0A0A6YYA0 188 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 IGHV3-15A0A0B4J1V0 119 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 DNAJA2O60884 412 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 SS18L1O75177 396 aaPredicted RBP11.19□□□□□ -0.62
PTCD1-205ENST00000485746 PGM3O95394 542 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 THBS1P07996 1170 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 ARAFP10398 606 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 CD1EP15812 388 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 CD79BP40259 229 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 SLC1A3P43003 542 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 OR2B6P58173 313 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 RAC3P60763 192 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 FAM27E3Q08E93 113 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 EPS8Q12929 822 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 CYLC2Q14093 348 aaPredicted RBP11.19□□□□□ -0.62
PTCD1-205ENST00000485746 SCARB2Q14108 478 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 MAPRE2Q15555 327 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 MAPK11Q15759 364 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 CYP51A1Q16850 503 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 SYT14P1Q58G82 188 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 RUNDC3AQ59EK9 446 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 REEP3Q6NUK4 255 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 TMPPEQ6ZT21 453 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 MSRB3Q8IXL7 192 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 DNAJA3Q96EY1 480 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 ZNF607Q96SK3 696 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 CGREF1Q99674 301 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 CCDC106Q9BWC9 280 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 ZNF385DQ9H6B1 395 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 COQ10BQ9H8M1 238 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 ELOVL5Q9NYP7 299 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 RPS6KB2Q9UBS0 482 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 ANGPT4Q9Y264 503 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 TMED7Q9Y3B3 224 aa11.19□□□□□ -0.62
PTCD1-205ENST00000485746 CDHR4A6H8M9 788 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 ETV2O00321 342 aaPredicted RBP11.18□□□□□ -0.62
PTCD1-205ENST00000485746 CD8BP10966 210 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 EPXP11678 715 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 BMP2P12643 396 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 ETS2P15036 469 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 HOXB9P17482 250 aaPredicted RBP11.18□□□□□ -0.62
PTCD1-205ENST00000485746 TACR3P29371 465 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 CLK1P49759 484 aaKnown RBP11.18□□□□□ -0.62
PTCD1-205ENST00000485746 DIO1P49895 249 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 RASGEF1BQ0VAM2 473 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 RNF220Q5VTB9 566 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 WBP2NLQ6ICG8 309 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 ZNF474Q6S9Z5 364 aaPredicted RBP11.18□□□□□ -0.62
PTCD1-205ENST00000485746 DLEU7Q6UYE1 221 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 ADGRG3Q86Y34 549 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 TUSC5Q8IXB3 177 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 CLIP4Q8N3C7 705 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 DPP10Q8N608 796 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 ABHD3Q8WU67 409 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 CPPED1Q9BRF8 314 aaPredicted RBP11.18□□□□□ -0.62
PTCD1-205ENST00000485746 GPATCH1Q9BRR8 931 aaKnown RBP11.18□□□□□ -0.62
PTCD1-205ENST00000485746 TACO1Q9BSH4 297 aaKnown RBP11.18□□□□□ -0.62
PTCD1-205ENST00000485746 POLDIP3Q9BY77 421 aaKnown RBP11.18□□□□□ -0.62
PTCD1-205ENST00000485746 CCDC134Q9H6E4 229 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 BCL2L10Q9HD36 194 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 PLSCR4Q9NRQ2 329 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 KLHL14Q9P2G3 628 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 KLHL9Q9P2J3 617 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 HDGFL3Q9Y3E1 203 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 PCNX1Q96RV3 2341 aa11.18□□□□□ -0.62
PTCD1-205ENST00000485746 DSPPQ9NZW4 1301 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 LOC100653049A0A140TA62 436 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 TMEM72A0PK05 275 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 SH3D21A4FU49 640 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 PRORSD1PA6NEY8 169 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 C16orf97H3BN30 126 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 FAAHO00519 579 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms