RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 INTS11Q5TA45 600 aaKnown RBP7.03□□□□□ -1.28
MACF1-220ENST00000485063 RNF220Q5VTB9 566 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 REP15Q6BDI9 236 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 ZNF836Q6ZNA1 936 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 SEM1Q6ZVN7 128 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 PLEKHM3Q6ZWE6 761 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 ADGRE4PQ86SQ3 457 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 GGNQ86UU5 652 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 SNX32Q86XE0 403 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 VRK2Q86Y07 508 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 MSRB3Q8IXL7 192 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 CNEP1R1Q8N9A8 125 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 C9orf106Q8NAJ2 232 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 OR10D3Q8NH80 312 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 POC1BQ8TC44 478 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 SLC26A7Q8TE54 656 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 CNOT9Q92600 299 aaKnown RBP7.03□□□□□ -1.28
MACF1-220ENST00000485063 OSTF1Q92882 214 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 MAL2Q969L2 176 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 INTS12Q96CB8 462 aaKnown RBP7.03□□□□□ -1.28
MACF1-220ENST00000485063 LRRC58Q96CX6 371 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 ZNF845Q96IR2 970 aaPredicted RBP7.03□□□□□ -1.28
MACF1-220ENST00000485063 OR5B2Q96R09 309 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 ECSITQ9BQ95 431 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 CPPED1Q9BRF8 314 aaPredicted RBP7.03□□□□□ -1.28
MACF1-220ENST00000485063 UCK2Q9BZX2 261 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 PIGMQ9H3S5 423 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 EVA1AQ9H8M9 152 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 GLRX2Q9NS18 164 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 DNAJB12Q9NXW2 375 aaKnown RBP7.03□□□□□ -1.28
MACF1-220ENST00000485063 ARMCX1Q9P291 453 aa7.03□□□□□ -1.28
MACF1-220ENST00000485063 KIAA1549Q9HCM3 1950 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 A0A0J9YW62 118 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 KDM4EB2RXH2 506 aaPredicted RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 H0YC42 278 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 ETV2O00321 342 aaPredicted RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 FAAHO00519 579 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 FBP2O00757 339 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 ADAMDEC1O15204 470 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 CXCL13O43927 109 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 SNX3O60493 162 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 SMNDC1O75940 238 aaKnown RBP eCLIP7.02□□□□□ -1.29
MACF1-220ENST00000485063 NTN1O95631 604 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 TGM6O95932 706 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 CD1EP15812 388 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 CXCR1P25024 350 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 GRNP28799 593 aaKnown RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 PRKAR1BP31321 381 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 UQCRC1P31930 480 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 SLC1A3P43003 542 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 CPA2P48052 419 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 CLK1P49759 484 aaKnown RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 POLR2HP52434 150 aaKnown RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 AGFG1P52594 562 aaKnown RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 TPD52P55327 224 aaPredicted RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 CTBP2P56545 445 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 CSNK2A1P68400 391 aaPredicted RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 EPS8Q12929 822 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 CAPRIN1Q14444 709 aaKnown RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 CDSNQ15517 529 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 MAPK11Q15759 364 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 SYT14P1Q58G82 188 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 WBP2NLQ6ICG8 309 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 NANOGP8Q6NSW7 305 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 ERICH5Q6P6B1 374 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 MEX3BQ6ZN04 569 aaKnown RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 ARPINQ7Z6K5 226 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 PATL1Q86TB9 770 aaKnown RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 SERPINA11Q86U17 422 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 MTDHQ86UE4 582 aaKnown RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 KIF18BQ86Y91 864 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 LIX1LQ8IVB5 337 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 GCNT2Q8N0V5 402 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 SLC43A2Q8N370 569 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 CADM2Q8N3J6 435 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 NAXEQ8NCW5 288 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 OR8J3Q8NGG0 315 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 OR10A6Q8NH74 314 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 FNDC9Q8TBE3 224 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 RASSF5Q8WWW0 418 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 FIG4Q92562 907 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 SLC35B4Q969S0 331 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 DDIT4LQ96D03 193 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 CMTM5Q96DZ9 223 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 ZHX1-C8orf76Q96EF9 292 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 GMPPAQ96IJ6 420 aaPredicted RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 NPAS1Q99742 590 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 IKZF5Q9H5V7 419 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 KAT8Q9H7Z6 458 aaKnown RBP7.02□□□□□ -1.29
MACF1-220ENST00000485063 NANOGQ9H9S0 305 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 RNF122Q9H9V4 155 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 EFCAB1Q9HAE3 211 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 FANCFQ9NPI8 374 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 CTPS2Q9NRF8 586 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 RLIMQ9NVW2 624 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 SELENONQ9NZV5 590 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 RPS6KB2Q9UBS0 482 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 CHRNA9Q9UGM1 479 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 PACSIN3Q9UKS6 424 aa7.02□□□□□ -1.29
MACF1-220ENST00000485063 AP3M1Q9Y2T2 418 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms