RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 COQ10BQ9H8M1 238 aa14.27□□□□□ -0.13
UPF3A-208ENST00000484246 SERINC1Q9NRX5 453 aa14.27□□□□□ -0.13
UPF3A-208ENST00000484246 RLIMQ9NVW2 624 aa14.27□□□□□ -0.13
UPF3A-208ENST00000484246 ARL2BPQ9Y2Y0 163 aa14.27□□□□□ -0.13
UPF3A-208ENST00000484246 PRSS44E7EML9 344 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 EIF1AYO14602 144 aaKnown RBP14.26□□□□□ -0.13
UPF3A-208ENST00000484246 DVL2O14641 736 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 SERPINB7O75635 380 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 TMIGD3P0DMS9 266 aaPredicted RBP14.26□□□□□ -0.13
UPF3A-208ENST00000484246 IGFBP2P18065 325 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 OPRM1P35372 400 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 SLC1A3P43003 542 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 EIF1AXP47813 144 aaKnown RBP14.26□□□□□ -0.13
UPF3A-208ENST00000484246 CLK1P49759 484 aaKnown RBP14.26□□□□□ -0.13
UPF3A-208ENST00000484246 MERTKQ12866 999 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 VMACQ2NL98 169 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 RABL3Q5HYI8 236 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 INTS11Q5TA45 600 aaKnown RBP14.26□□□□□ -0.13
UPF3A-208ENST00000484246 HBMQ6B0K9 141 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 ERICH5Q6P6B1 374 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 CCDC80Q76M96 950 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 POU5F2Q8N7G0 328 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 RELL2Q8NC24 303 aaPredicted RBP14.26□□□□□ -0.13
UPF3A-208ENST00000484246 OR10A6Q8NH74 314 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 ZNF563Q8TA94 476 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 FIG4Q92562 907 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 CPNE4Q96A23 557 aaPredicted RBP14.26□□□□□ -0.13
UPF3A-208ENST00000484246 CMTM5Q96DZ9 223 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 ZNF845Q96IR2 970 aaPredicted RBP14.26□□□□□ -0.13
UPF3A-208ENST00000484246 ADAM19Q9H013 955 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 TMEM185BQ9H7F4 350 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 KCNJ16Q9NPI9 418 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 CHRNA9Q9UGM1 479 aa14.26□□□□□ -0.13
UPF3A-208ENST00000484246 SPIN1Q9Y657 262 aaPredicted RBP14.26□□□□□ -0.13
UPF3A-208ENST00000484246 DIDO1Q9BTC0 2240 aaKnown RBP14.26□□□□□ -0.13
UPF3A-208ENST00000484246 SPTBN1Q01082 2364 aaKnown RBP14.25□□□□□ -0.13
UPF3A-208ENST00000484246 SYT5O00445 386 aa14.25□□□□□ -0.13
UPF3A-208ENST00000484246 TNFSF11O14788 317 aa14.25□□□□□ -0.13
UPF3A-208ENST00000484246 GCM2O75603 506 aaPredicted RBP14.25□□□□□ -0.13
UPF3A-208ENST00000484246 MFN2O95140 757 aa14.25□□□□□ -0.13
UPF3A-208ENST00000484246 FAM107AO95990 144 aa14.25□□□□□ -0.13
UPF3A-208ENST00000484246 RYKP34925 604 aa14.25□□□□□ -0.13
UPF3A-208ENST00000484246 IDH2P48735 452 aaKnown RBP14.25□□□□□ -0.13
UPF3A-208ENST00000484246 POLR2HP52434 150 aaKnown RBP14.25□□□□□ -0.13
UPF3A-208ENST00000484246 VEZF1Q14119 521 aa14.25□□□□□ -0.13
UPF3A-208ENST00000484246 PON3Q15166 354 aa14.25□□□□□ -0.13
UPF3A-208ENST00000484246 ZNF239Q16600 458 aaKnown RBP14.25□□□□□ -0.13
UPF3A-208ENST00000484246 SYT14P1Q58G82 188 aa14.25□□□□□ -0.13
UPF3A-208ENST00000484246 PATL1Q86TB9 770 aaKnown RBP14.25□□□□□ -0.13
UPF3A-208ENST00000484246 FNDC9Q8TBE3 224 aa14.25□□□□□ -0.13
UPF3A-208ENST00000484246 EFCAB1Q9HAE3 211 aa14.25□□□□□ -0.13
UPF3A-208ENST00000484246 TIGARQ9NQ88 270 aa14.25□□□□□ -0.13
UPF3A-208ENST00000484246 JKAMPQ9P055 326 aa14.25□□□□□ -0.13
UPF3A-208ENST00000484246 MCTS1Q9ULC4 181 aaKnown RBP14.25□□□□□ -0.13
UPF3A-208ENST00000484246 PHF3Q92576 2039 aaKnown RBP14.25□□□□□ -0.13
UPF3A-208ENST00000484246 MYO7BQ6PIF6 2116 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 A0A1W2PNV4 684 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 FAM90A27PA6NNH2 459 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 FAM220BPB1ANY3 271 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 ZNF208O43345 1280 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 DNPH1O43598 174 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 CXCL13O43927 109 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 TNFSF13O75888 250 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 DCTN3O75935 186 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 GRNP28799 593 aaKnown RBP14.24□□□□□ -0.13
UPF3A-208ENST00000484246 SFTPDP35247 375 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 PCYT1AP49585 367 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 ASCL1P50553 236 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 RAC3P60763 192 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 SGCBQ16585 318 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 TMEM176BQ3YBM2 270 aaPredicted RBP14.24□□□□□ -0.13
UPF3A-208ENST00000484246 WBP2NLQ6ICG8 309 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 C6orf89Q6UWU4 347 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 P4HA3Q7Z4N8 544 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 COMTD1Q86VU5 262 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 ADGRG3Q86Y34 549 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 RNF128Q8TEB7 428 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 ZNF583Q96ND8 569 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 CCT8L2Q96SF2 557 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 HOPXQ9BPY8 73 aaPredicted RBP14.24□□□□□ -0.13
UPF3A-208ENST00000484246 ECSITQ9BQ95 431 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 ENKD1Q9H0I2 346 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 PIGMQ9H3S5 423 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 C12orf10Q9HB07 376 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 GP6Q9HCN6 339 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 NPDC1Q9NQX5 325 aaPredicted RBP14.24□□□□□ -0.13
UPF3A-208ENST00000484246 CTPS2Q9NRF8 586 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 GLRX2Q9NS18 164 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 OSGIN1Q9UJX0 560 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 HDGFL3Q9Y3E1 203 aa14.24□□□□□ -0.13
UPF3A-208ENST00000484246 MED12Q93074 2177 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 NDUFAB1O14561 156 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 SS18L1O75177 396 aaPredicted RBP14.23□□□□□ -0.13
UPF3A-208ENST00000484246 AQP8O94778 261 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 SYNGR4O95473 234 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 C8BP07358 591 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 GKN3PP0CG01 181 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 PRG2P13727 222 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 BMP5P22003 454 aa14.23□□□□□ -0.13
UPF3A-208ENST00000484246 TACR3P29371 465 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms