RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 CHRNEQ04844 493 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 FAM27E3Q08E93 113 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 RBBP4Q09028 425 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 SKP2Q13309 424 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 SYPL1Q16563 259 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 ACKR1Q16570 336 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 LIN52Q52LA3 116 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 RUNDC3AQ59EK9 446 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 PAGE3Q5JUK9 113 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 COX20Q5RI15 118 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 PDSS1Q5T2R2 415 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 OR2A2Q6IF42 318 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 DLEU7Q6UYE1 221 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 ESPNLQ6ZVH7 1005 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 DHDDSQ86SQ9 333 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 GRAMD2AQ8IUY3 354 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 SLC30A8Q8IWU4 369 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 ZNF614Q8N883 585 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 ANKFN1Q8N957 763 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 GATSQ8NAP1 163 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 PCYOX1LQ8NBM8 494 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 BHLHE22Q8NFJ8 381 aaPredicted RBP8.97□□□□□ -0.97
CPSF4-213ENST00000484112 BBS10Q8TAM1 723 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 PNPT1Q8TCS8 783 aaKnown RBP8.97□□□□□ -0.97
CPSF4-213ENST00000484112 GPR119Q8TDV5 335 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 SLC38A5Q8WUX1 472 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 WDR60Q8WVS4 1066 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 ANKRD27Q96NW4 1050 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 WFIKKN1Q96NZ8 548 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 PIP5K1AQ99755 562 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 SPATA9Q9BWV2 254 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 PIGMQ9H3S5 423 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 EVA1AQ9H8M9 152 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 SAR1AQ9NR31 198 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 SLC25A37Q9NYZ2 338 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 VAPAQ9P0L0 249 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 KCNE5Q9UJ90 142 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 ZNF232Q9UNY5 417 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 VDAC3Q9Y277 283 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 CARD8Q9Y2G2 431 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 ZNF337Q9Y3M9 751 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 ZNF175Q9Y473 711 aa8.97□□□□□ -0.97
CPSF4-213ENST00000484112 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 NPIPA5A0A0B4J1W7 369 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 A8MXE2 369 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 C5orf58C9J3I9 102 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 NPIPA7E9PJI5 369 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 ADAMDEC1O15204 470 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 NTN1O95631 604 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 CHRM4P08173 479 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 NPIPA8P0DM63 369 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 ETFAP13804 333 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 PRKCAP17252 672 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 FPR1P21462 350 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 TCEA1P23193 301 aaKnown RBP8.96□□□□□ -0.98
CPSF4-213ENST00000484112 HTR3AP46098 478 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 KLF10Q13118 480 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 SELENBP1Q13228 472 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 CYLC2Q14093 348 aaPredicted RBP8.96□□□□□ -0.98
CPSF4-213ENST00000484112 LARS2Q15031 903 aaKnown RBP8.96□□□□□ -0.98
CPSF4-213ENST00000484112 MAPK14Q16539 360 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 TRMT5Q32P41 509 aaKnown RBP8.96□□□□□ -0.98
CPSF4-213ENST00000484112 GTDC1Q4AE62 458 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 GCNT6Q5T4J0 391 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 RNF220Q5VTB9 566 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 CBLN3Q6UW01 205 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 PRSS57Q6UWY2 283 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 P4HA3Q7Z4N8 544 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 SERPINA11Q86U17 422 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 KRT73Q86Y46 540 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 MSRB3Q8IXL7 192 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 CNEP1R1Q8N9A8 125 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 SPATA3Q8NHX4 192 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 RP9Q8TA86 221 aaKnown RBP8.96□□□□□ -0.98
CPSF4-213ENST00000484112 SLC25A43Q8WUT9 341 aaPredicted RBP8.96□□□□□ -0.98
CPSF4-213ENST00000484112 C10orf82Q8WW14 230 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 AURKBQ96GD4 344 aaPredicted RBP8.96□□□□□ -0.98
CPSF4-213ENST00000484112 ZC3HAV1LQ96H79 300 aaKnown RBP8.96□□□□□ -0.98
CPSF4-213ENST00000484112 SH3YL1Q96HL8 342 aaPredicted RBP8.96□□□□□ -0.98
CPSF4-213ENST00000484112 CGREF1Q99674 301 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 SPATA5L1Q9BVQ7 753 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 TIGARQ9NQ88 270 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 ZNF226Q9NYT6 803 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 CLCF1Q9UBD9 225 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.96□□□□□ -0.98
CPSF4-213ENST00000484112 ADAM21Q9UKJ8 722 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 PACSIN3Q9UKS6 424 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 AP3M1Q9Y2T2 418 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 TESMINQ9Y4I5 508 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 SPIN1Q9Y657 262 aaPredicted RBP8.96□□□□□ -0.98
CPSF4-213ENST00000484112 CAPN7Q9Y6W3 813 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 VPS13CQ709C8 3753 aa8.96□□□□□ -0.98
CPSF4-213ENST00000484112 CDHR4A6H8M9 788 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 GMNCA6NCL1 334 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 PRORSD1PA6NEY8 169 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 C17orf51A8MQB3 221 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 DEFB108AA8MXU0 73 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 H3BML4 177 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 SIAH2O43255 324 aa8.95□□□□□ -0.98
CPSF4-213ENST00000484112 SERPINB7O75635 380 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms