RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 SNTA1Q13424 505 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 GRB7Q14451 532 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 CYTH1Q15438 398 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 CD226Q15762 336 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 HSDL1Q3SXM5 330 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 CCDC137Q6PK04 289 aaKnown RBP3.8□□□□□ -1.8
PTCD3-214ENST00000483925 NDUFAF7Q7L592 441 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 CHMP1BQ7LBR1 199 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 IFNEQ86WN2 208 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 CATSPERDQ86XM0 798 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 RNF130Q86XS8 419 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 HPS6Q86YV9 775 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 LRRC49Q8IUZ0 686 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 CMTM8Q8IZV2 173 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 PELI3Q8N2H9 469 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 NRACQ8N912 160 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 C8orf31Q8N9H6 132 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 OR9Q2Q8NGE9 314 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 OR5L2Q8NGL0 311 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 OR4A15Q8NGL6 344 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 OR4C3Q8NH37 302 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 OR6S1Q8NH40 331 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 GATAD1Q8WUU5 269 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 C17orf50Q8WW18 174 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 SORCS1Q8WY21 1168 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 DYRK2Q92630 601 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 KIFAP3Q92845 792 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 NAT6Q93015 286 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 ADGRG7Q96K78 797 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 GLT1D1Q96MS3 346 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 ZNF641Q96N77 438 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-214ENST00000483925 CSPG4P5Q96PW8 444 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 RACGAP1Q9H0H5 632 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 RAB1BQ9H0U4 201 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 IKZF5Q9H5V7 419 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 PLEKHA3Q9HB20 300 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 DMAP1Q9NPF5 467 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-214ENST00000483925 ZNF302Q9NR11 478 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 CUTCQ9NTM9 273 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 GPATCH2LQ9NWQ4 482 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 WWOXQ9NZC7 414 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 SEC14L4Q9UDX3 406 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 KCNG2Q9UJ96 466 aa3.8□□□□□ -1.8
PTCD3-214ENST00000483925 ARID2Q68CP9 1835 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 BRD4O60885 1362 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 IGHV2-70DA0A0C4DH43 119 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 A0A1W2PRD5 423 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 TMEM120BA0PK00 339 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 LRRIQ3A6PVS8 624 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 C11orf98E9PRG8 122 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 M0R3G1 203 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 SIRPB1O00241 398 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 NDUFAB1O14561 156 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 TNFSF12O43508 249 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 CBR3O75828 277 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 NOL4O94818 638 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 SMC2O95347 1197 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 GPIP06744 558 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 DCNP07585 359 aaKnown RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 MYOGP15173 224 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 CD82P27701 267 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 NAA10P41227 235 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 QARSP47897 775 aaKnown RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 NPBWR2P48146 333 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 KCNJ3P48549 501 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 ARRB1P49407 418 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 PLTPP55058 493 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 LINC00205P59089 165 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 CTAG1AP78358 180 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 PLOD1Q02809 727 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 P2RY6Q15077 328 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 TWIST1Q15672 202 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 NDUFA9Q16795 377 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 UNC50Q53HI1 259 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 C6orf183Q5T699 404 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 SLC22A10Q63ZE4 541 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 REEP3Q6NUK4 255 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 ULK3Q6PHR2 472 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 STOX1Q6ZVD7 989 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 HDDC2Q7Z4H3 204 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 RBM23Q86U06 439 aaKnown RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 NUDCD3Q8IVD9 361 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 NKAIN4Q8IVV8 208 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 GPR65Q8IYL9 337 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 JAGN1Q8N5M9 183 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 KIR3DL3Q8N743 410 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 DNAAF3Q8N9W5 541 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 INO80EQ8NBZ0 244 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 FBXO36Q8NEA4 188 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 OR4D9Q8NGE8 314 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 OR10G8Q8NGN5 311 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 PCNPQ8WW12 178 aaKnown RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 PIH1D2Q8WWB5 315 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 NR4A3Q92570 626 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 MRPS31Q92665 395 aaKnown RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 BIRC7Q96CA5 298 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 CCDC124Q96CT7 223 aaKnown RBP3.79□□□□□ -1.8
PTCD3-214ENST00000483925 ST6GAL2Q96JF0 529 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 RCHY1Q96PM5 261 aa3.79□□□□□ -1.8
PTCD3-214ENST00000483925 ALKBH3Q96Q83 286 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms