RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 PLAURQ03405 335 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 MAPK14Q16539 360 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 ZSWIM7Q19AV6 140 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 PDZK1Q5T2W1 519 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 C8orf74Q6P047 294 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 KLHL17Q6TDP4 642 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 ZYG11AQ6WRX3 759 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 SYT10Q6XYQ8 523 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 SSX8Q7RTT4 187 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 OR5D16Q8NGK9 328 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 PSMA8Q8TAA3 256 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 IFT81Q8WYA0 676 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 APH1AQ96BI3 265 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 CCT7Q99832 543 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 CCDC106Q9BWC9 280 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 ACTRT3Q9BYD9 372 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 BPESC1Q9GZL8 116 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 SLC17A5Q9NRA2 495 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 SLC7A10Q9NS82 523 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 TAS2R16Q9NYV7 291 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 ATP6V1HQ9UI12 483 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 MOKQ9UQ07 419 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 NOSIPQ9Y314 301 aaKnown RBP11.25□□□□□ -0.61
UBR4-213ENST00000483922 PMF1-BGLAPU3KQ54 211 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 MGAM2Q2M2H8 2515 aa11.25□□□□□ -0.61
UBR4-213ENST00000483922 SERINC4A6NH21 518 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 SULT2B1O00204 365 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 NDUFS8O00217 210 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 LSM1O15116 133 aaKnown RBP11.24□□□□□ -0.61
UBR4-213ENST00000483922 UGT2B17O75795 530 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 VENTXO95231 258 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 PROCP04070 461 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 IGFBP1P08833 259 aaPredicted RBP11.24□□□□□ -0.61
UBR4-213ENST00000483922 CSF3P09919 207 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 LINC00032P0C843 101 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 UBL4AP11441 157 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 ZNF23P17027 643 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 EGR1P18146 543 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 CCT3P49368 545 aaKnown RBP11.24□□□□□ -0.61
UBR4-213ENST00000483922 SLC16A1P53985 500 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 PHC1P78364 1004 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 H3F3AP84243 136 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 CHRNB3Q05901 458 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 SQLEQ14534 574 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 UGT3A2Q3SY77 523 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 TSPO2Q5TGU0 170 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 LIPNQ5VXI9 398 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 C3orf33Q6P1S2 294 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 LCA5Q86VQ0 697 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 DEPDC4Q8N2C3 294 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 ZNF614Q8N883 585 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 NOA1Q8NC60 698 aaKnown RBP11.24□□□□□ -0.61
UBR4-213ENST00000483922 TOR1AIP2Q8NFQ8 470 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 CHMP6Q96FZ7 201 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 OR7D2Q96RA2 312 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 BHLHE41Q9C0J9 482 aaPredicted RBP11.24□□□□□ -0.61
UBR4-213ENST00000483922 OR11A1Q9GZK7 315 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 LAT2Q9GZY6 243 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 ADAM19Q9H013 955 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 CTPS2Q9NRF8 586 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 ACER3Q9NUN7 267 aa11.24□□□□□ -0.61
UBR4-213ENST00000483922 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.24□□□□□ -0.61
UBR4-213ENST00000483922 HEATR1Q9H583 2144 aaKnown RBP11.23□□□□□ -0.61
UBR4-213ENST00000483922 EXOC1LA0A1B0GW35 172 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 LOC390937A0A1W2PQ73 354 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 SLC28A1O00337 649 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 SPRY1O43609 319 aaPredicted RBP11.23□□□□□ -0.61
UBR4-213ENST00000483922 TCF21O43680 179 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 KIAA0513O60268 411 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 LILRA1O75019 489 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 URI1O94763 535 aaPredicted RBP11.23□□□□□ -0.61
UBR4-213ENST00000483922 GSTA1P08263 222 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 ATP6V1C1P21283 382 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 ASMTP46597 345 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 CCR4P51679 360 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 DNAJB13P59910 316 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 RPS26P62854 115 aaKnown RBP11.23□□□□□ -0.61
UBR4-213ENST00000483922 RPL38P63173 70 aaKnown RBP11.23□□□□□ -0.61
UBR4-213ENST00000483922 MERTKQ12866 999 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 CBFBQ13951 182 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 ZNF141Q15928 474 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 FAM174BQ3ZCQ3 159 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 SYT14P1Q58G82 188 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 LIPMQ5VYY2 423 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 ADGRG3Q86Y34 549 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 CLEC4FQ8N1N0 589 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 RFLNBQ8N5W9 214 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 TMCO5AQ8N6Q1 288 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 ZIC4Q8N9L1 334 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 ADAMTS15Q8TE58 950 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 ST8SIA1Q92185 356 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 ZG16BQ96DA0 208 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 MTERF3Q96E29 417 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 FMO2Q99518 471 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 GRPEL1Q9HAV7 217 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 OXSMQ9NWU1 459 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 DNAJC15Q9Y5T4 150 aa11.23□□□□□ -0.61
UBR4-213ENST00000483922 CMYA5Q8N3K9 4069 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 IGHV1-18A0A0C4DH31 117 aa11.22□□□□□ -0.61
UBR4-213ENST00000483922 TMEM233B4DJY2 109 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms