RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 BCO1Q9HAY6 547 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 GP6Q9HCN6 339 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 CTPS2Q9NRF8 586 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 KLHL9Q9P2J3 617 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 MARCOQ9UEW3 520 aaPredicted RBP16.46■□□□□ 0.23
CLK1-211ENST00000481641 RAB21Q9UL25 225 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 NSD1Q96L73 2696 aaPredicted RBP16.46■□□□□ 0.23
CLK1-211ENST00000481641 CADP27708 2225 aa16.46■□□□□ 0.23
CLK1-211ENST00000481641 GOLGA8QA0A0J9YX86 632 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 GOLGA8OA6NCC3 632 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 E9PBE3 544 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 GOLGA8NF8WBI6 632 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 HMGN4O00479 90 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 CLOCKO15516 846 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 CYTIPO60759 359 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 ADAM11O75078 769 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 LYZL6O75951 148 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 FESP07332 822 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 TFPIP10646 304 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 CDKN2CP42773 168 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 OR3A2P47893 321 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 DIO1P49895 249 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 KHKP50053 298 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 WDR4P57081 412 aaKnown RBP16.45■□□□□ 0.22
CLK1-211ENST00000481641 CAPRIN1Q14444 709 aaKnown RBP16.45■□□□□ 0.22
CLK1-211ENST00000481641 HHATQ5VTY9 493 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 TMPPEQ6ZT21 453 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 BHLHA15Q7RTS1 189 aaPredicted RBP16.45■□□□□ 0.22
CLK1-211ENST00000481641 RNF130Q86XS8 419 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 ANKFN1Q8N957 763 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 ZNF563Q8TA94 476 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 TMEM171Q8WVE6 324 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 TMEM234Q8WY98 164 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 KISS1RQ969F8 398 aaPredicted RBP16.45■□□□□ 0.22
CLK1-211ENST00000481641 ARL8AQ96BM9 186 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 CCDC115Q96NT0 180 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 GSX2Q9BZM3 304 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 WDR55Q9H6Y2 383 aaPredicted RBP16.45■□□□□ 0.22
CLK1-211ENST00000481641 SERINC1Q9NRX5 453 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 AIG1Q9NVV5 245 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 FN1P02751 2386 aaKnown RBP16.45■□□□□ 0.22
CLK1-211ENST00000481641 ZANQ9Y493 2812 aa16.45■□□□□ 0.22
CLK1-211ENST00000481641 TLN2Q9Y4G6 2542 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 SULT2B1O00204 365 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 SNUPNO95149 360 aaKnown RBP16.44■□□□□ 0.22
CLK1-211ENST00000481641 AGR2O95994 175 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 GSNP06396 782 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 KITP10721 976 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 CCNA2P20248 432 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 ITGADQ13349 1161 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 SYPL1Q16563 259 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 SYT14P1Q58G82 188 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 NCMAPQ5T1S8 102 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 OGFOD2Q6N063 350 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 ZNF611Q8N823 705 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 MGARPQ8TDB4 240 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 CNOT9Q92600 299 aaKnown RBP16.44■□□□□ 0.22
CLK1-211ENST00000481641 CCDC106Q9BWC9 280 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 POLE3Q9NRF9 147 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 BTNL2Q9UIR0 455 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 LAMP3Q9UQV4 416 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 SLC35A3Q9Y2D2 325 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 CSPG4Q6UVK1 2322 aa16.44■□□□□ 0.22
CLK1-211ENST00000481641 CCDC154A6NI56 674 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 AP3D1O14617 1153 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 ZNF500O60304 480 aaPredicted RBP16.43■□□□□ 0.22
CLK1-211ENST00000481641 HEXAP06865 529 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 EPHA3P29320 983 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 KCNJ10P78508 379 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 P2RY6Q15077 328 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 STK11Q15831 433 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 DPY19L1Q2PZI1 675 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 SEZ6L2Q6UXD5 910 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 Q6ZT83 130 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 LRRC34Q8IZ02 419 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 PNPT1Q8TCS8 783 aaKnown RBP16.43■□□□□ 0.22
CLK1-211ENST00000481641 HSD17B8Q92506 261 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 ARL5BQ96KC2 179 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 BDH2Q9BUT1 245 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 OR11A1Q9GZK7 315 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.43■□□□□ 0.22
CLK1-211ENST00000481641 RNF115Q9Y4L5 304 aa16.43■□□□□ 0.22
CLK1-211ENST00000481641 DPRXA6NFQ7 191 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 ZNF724A8MTY0 619 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 CNOT4O95628 575 aaKnown RBP16.42■□□□□ 0.22
CLK1-211ENST00000481641 IGHV3-9P01782 118 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 CD3EP07766 207 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 CHRM4P08173 479 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 GUSBP08236 651 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 IGHV1-2P23083 117 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 APOBEC1P41238 236 aaKnown RBP16.42■□□□□ 0.22
CLK1-211ENST00000481641 IDH2P48735 452 aaKnown RBP16.42■□□□□ 0.22
CLK1-211ENST00000481641 HPCAP84074 193 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 COX20Q5RI15 118 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 AP1ARQ63HQ0 302 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 ZNF621Q6ZSS3 439 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 GALNT5Q7Z7M9 940 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 MTDHQ86UE4 582 aaKnown RBP16.42■□□□□ 0.22
CLK1-211ENST00000481641 ADGRG3Q86Y34 549 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 ZNF100Q8IYN0 542 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms