RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 TRBV4-1A0A0J9YWV2 114 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 H0YAE9 185 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 MKRN2OSH3BPM6 223 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 MASP2O00187 686 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 SOCS2O14508 198 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 OR2T1O43869 369 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 OR10H3O60404 316 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 ADAM11O75078 769 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 LYPD3O95274 346 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 NTN1O95631 604 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 CBLP22681 906 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 IGFBP5P24593 272 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 CXCR1P25024 350 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 FPR3P25089 353 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 TNFSF10P50591 281 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 UGT2B15P54855 530 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 ESRRGP62508 458 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 HOXC5Q00444 222 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 ALDH6A1Q02252 535 aaKnown RBP9.24□□□□□ -0.93
USP39-215ENST00000481409 PRKCDQ05655 676 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 MFSD13AQ14CX5 517 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 INAQ16352 499 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 OTUD3Q5T2D3 398 aaPredicted RBP9.24□□□□□ -0.93
USP39-215ENST00000481409 PRAMEF20Q5VT98 475 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 UNQ6494/PRO21346Q6UXR6 183 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 LINC00696Q6ZRV3 163 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 MDGA2Q7Z553 956 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 TMEM179BQ7Z7N9 219 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 ZNF227Q86WZ6 799 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 OR4K5Q8NGD3 323 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 MAGEE2Q8TD90 523 aaPredicted RBP9.24□□□□□ -0.93
USP39-215ENST00000481409 SLC25A43Q8WUT9 341 aaPredicted RBP9.24□□□□□ -0.93
USP39-215ENST00000481409 LIPHQ8WWY8 451 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 SH3YL1Q96HL8 342 aaPredicted RBP9.24□□□□□ -0.93
USP39-215ENST00000481409 FEVQ99581 238 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 PRSS27Q9BQR3 290 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 DSN1Q9H410 356 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 MED17Q9NVC6 651 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 VNN3Q9NY84 501 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 MED11Q9P086 117 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 RHCGQ9UBD6 479 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 TUBD1Q9UJT1 453 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 RAB26Q9ULW5 256 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 HEATR5AQ86XA9 2040 aa9.24□□□□□ -0.93
USP39-215ENST00000481409 A6NL46 340 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 GJE1A6NN92 205 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 A8MVM7 634 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 PDLIM1O00151 329 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 ACOT7O00154 380 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 OIP5O43482 229 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 MT-ATP6P00846 226 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 THY1P04216 161 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 PRKCAP17252 672 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 TACR3P29371 465 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 SLC9A3P48764 834 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 IST1P53990 364 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 TSPAN31Q12999 210 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 LRRC36Q1X8D7 754 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 PLPPR5Q32ZL2 321 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 NDUFAF6Q330K2 333 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 WLSQ5T9L3 541 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 TTC23Q5W5X9 447 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 BICRALQ6AI39 1079 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 SPINK14Q6IE38 97 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 PGBD2Q6P3X8 592 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 IZUMO2Q6UXV1 221 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 TMPRSS11FQ6ZWK6 438 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 TSPYL5Q86VY4 417 aaPredicted RBP9.23□□□□□ -0.93
USP39-215ENST00000481409 NKAIN4Q8IVV8 208 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 GTPBP8Q8N3Z3 284 aaPredicted RBP9.23□□□□□ -0.93
USP39-215ENST00000481409 AMER2Q8N7J2 671 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 CLDN22Q8N7P3 220 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 ZFP62Q8NB50 900 aaPredicted RBP9.23□□□□□ -0.93
USP39-215ENST00000481409 AQP11Q8NBQ7 271 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 OR2M7Q8NG81 312 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 TMEM255BQ8WV15 326 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 DDIT4LQ96D03 193 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 SLC29A1Q99808 456 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 PIGQQ9BRB3 760 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 POTEKPQ9BYX7 375 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 NDEL1Q9GZM8 345 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.23□□□□□ -0.93
USP39-215ENST00000481409 PAPOLBQ9NRJ5 636 aaKnown RBP9.23□□□□□ -0.93
USP39-215ENST00000481409 KRT84Q9NSB2 600 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 C15orf41Q9Y2V0 281 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 LRRC42Q9Y546 428 aa9.23□□□□□ -0.93
USP39-215ENST00000481409 MED13Q9UHV7 2174 aa9.22□□□□□ -0.93
USP39-215ENST00000481409 ACADSP16219 412 aa9.22□□□□□ -0.93
USP39-215ENST00000481409 DPP4P27487 766 aa9.22□□□□□ -0.93
USP39-215ENST00000481409 OMPP47874 163 aa9.22□□□□□ -0.93
USP39-215ENST00000481409 GSSP48637 474 aa9.22□□□□□ -0.93
USP39-215ENST00000481409 DAPP51397 102 aa9.22□□□□□ -0.93
USP39-215ENST00000481409 FOXO1Q12778 655 aa9.22□□□□□ -0.93
USP39-215ENST00000481409 SELENBP1Q13228 472 aa9.22□□□□□ -0.93
USP39-215ENST00000481409 IL18R1Q13478 541 aa9.22□□□□□ -0.93
USP39-215ENST00000481409 SEC23BQ15437 767 aa9.22□□□□□ -0.93
USP39-215ENST00000481409 TMEM44Q2T9K0 475 aa9.22□□□□□ -0.93
USP39-215ENST00000481409 CMPK2Q5EBM0 449 aa9.22□□□□□ -0.93
USP39-215ENST00000481409 ZNF766Q5HY98 468 aa9.22□□□□□ -0.93
USP39-215ENST00000481409 RPUSD3Q6P087 351 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms