RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 AK1P00568 194 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 NPPAP01160 153 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 S1PR1P21453 382 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 CFL1P23528 166 aaKnown RBP5.67□□□□□ -1.5
SF3B1-209ENST00000479532 IFNA8P32881 189 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 PTGER1P34995 402 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 CYB561P49447 251 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 CLK3P49761 638 aaKnown RBP5.67□□□□□ -1.5
SF3B1-209ENST00000479532 KHKP50053 298 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 EMDP50402 254 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 BLVRAP53004 296 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 AQP4P55087 323 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 P2RX3P56373 397 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 WNT3P56703 355 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 PLCXD2Q0VAA5 305 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 MGAT2Q10469 447 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 NFYCQ13952 458 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 EFR3AQ14156 821 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 GNA13Q14344 377 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF846Q147U1 533 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 LASP1Q14847 261 aaKnown RBP5.67□□□□□ -1.5
SF3B1-209ENST00000479532 DECR1Q16698 335 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 DUSP7Q16829 419 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 PIGGQ5H8A4 983 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 COQ5Q5HYK3 327 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 FHL5Q5TD97 284 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 C1orf146Q5VVC0 180 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 B3GNTL1Q67FW5 361 aaPredicted RBP5.67□□□□□ -1.5
SF3B1-209ENST00000479532 CDC73Q6P1J9 531 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 ASB18Q6ZVZ8 466 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 C6orf120Q7Z4R8 191 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 SNX32Q86XE0 403 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 FUNDC1Q8IVP5 155 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 GLB1L2Q8IW92 636 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 SLC44A2Q8IWA5 706 aaPredicted RBP5.67□□□□□ -1.5
SF3B1-209ENST00000479532 SLC34A3Q8N130 599 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 CYP4Z2PQ8N1L4 340 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 BEST3Q8N1M1 668 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 PQLC1Q8N2U9 271 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 PACRGLQ8N7B6 248 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 COX18Q8N8Q8 333 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 SLC16A11Q8NCK7 471 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 TSPAN14Q8NG11 270 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 OR5AK3PQ8NH89 298 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 GOT1L1Q8NHS2 421 aaPredicted RBP5.67□□□□□ -1.5
SF3B1-209ENST00000479532 TBC1D15Q8TC07 691 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 GPR151Q8TDV0 419 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 HAS2Q92819 552 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 ZBTB8AQ96BR9 441 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 TAMM41Q96BW9 452 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 ISOC1Q96CN7 298 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 TMCO6Q96DC7 493 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 GIMAP5Q96F15 307 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 C5orf34Q96MH7 638 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 RASL10BQ96S79 203 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 STACQ99469 402 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 LMF2Q9BU23 707 aaKnown RBP5.67□□□□□ -1.5
SF3B1-209ENST00000479532 ITPAQ9BY32 194 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 SLA2Q9H6Q3 261 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 CXorf36Q9H7Y0 433 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 MARCH7Q9H992 704 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 HHATLQ9HCP6 504 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 HMG20AQ9NP66 347 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 SIRT3Q9NTG7 399 aaPredicted RBP5.67□□□□□ -1.5
SF3B1-209ENST00000479532 EXD2Q9NVH0 621 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 NTMQ9P121 344 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 LRFN1Q9P244 771 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF223Q9UK11 482 aaPredicted RBP5.67□□□□□ -1.5
SF3B1-209ENST00000479532 PRPF19Q9UMS4 504 aaKnown RBP5.67□□□□□ -1.5
SF3B1-209ENST00000479532 TP53TG5Q9Y2B4 290 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 UGT2A1Q9Y4X1 527 aa5.67□□□□□ -1.5
SF3B1-209ENST00000479532 CEP295Q9C0D2 2601 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 DOCK10Q96BY6 2186 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 TRAV17A0A0B4J275 112 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 LOC100653049A0A140TA62 436 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 OR5H15A6NDH6 313 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 H3BNH8 94 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 CLIC1O00299 241 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 MRASO14807 208 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 TO15178 435 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 ASNA1O43681 348 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 PRKNO60260 465 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-209ENST00000479532 NOL3O60936 208 aaKnown RBP5.66□□□□□ -1.5
SF3B1-209ENST00000479532 SCN2BO60939 215 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 REM1O75628 298 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 KRT34O76011 436 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 PGM3O95394 542 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 WDPCPO95876 746 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 CLPSP04118 112 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 P04436 131 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 HMGN2P05204 90 aaKnown RBP5.66□□□□□ -1.5
SF3B1-209ENST00000479532 TRAPPC2P0DI81 140 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 TRAPPC2BP0DI82 140 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 COX4I1P13073 169 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 HPGDP15428 266 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 CAPN3P20807 821 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 ABCD3P28288 659 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 LCN1P31025 176 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 RRM2P31350 389 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 GABRA3P34903 492 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms