RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 LATO43561 262 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 CSF2P04141 144 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 ALPPP05187 535 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 RBMY1A1P0DJD3 496 aaKnown RBP3.95□□□□□ -1.78
CCDC171-207ENST00000478913 GATA2P23769 480 aaPredicted RBP3.95□□□□□ -1.78
CCDC171-207ENST00000478913 ZFP36L2P47974 494 aaKnown RBP3.95□□□□□ -1.78
CCDC171-207ENST00000478913 SLC1A6P48664 564 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 TNFSF10P50591 281 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 NME5P56597 212 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 DSCR10P59022 87 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 RPS27AP62979 156 aaKnown RBP3.95□□□□□ -1.78
CCDC171-207ENST00000478913 PRKCEQ02156 737 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 ACY1Q03154 408 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 SPAG1Q07617 926 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 FASTKQ14296 549 aaKnown RBP3.95□□□□□ -1.78
CCDC171-207ENST00000478913 CAPRIN1Q14444 709 aaKnown RBP3.95□□□□□ -1.78
CCDC171-207ENST00000478913 CASC10Q5T4H9 136 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 C6orf52Q5T4I8 152 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 CAPN13Q6MZZ7 669 aaPredicted RBP3.95□□□□□ -1.78
CCDC171-207ENST00000478913 CD164L2Q6UWJ8 174 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 IGFL3Q6UXB1 125 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 Q6ZSR6 202 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 P2RY8Q86VZ1 359 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 ARL10Q8N8L6 244 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 CLEC1AQ8NC01 280 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 HAS2Q92819 552 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 TOMM40LQ969M1 308 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 FAM46BQ96A09 425 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 CFAP36Q96G28 342 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 CELF6Q96J87 481 aaKnown RBP3.95□□□□□ -1.78
CCDC171-207ENST00000478913 RCHY1Q96PM5 261 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 TBX15Q96SF7 602 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 S1PR3Q99500 378 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 CCDC28BQ9BUN5 200 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 RBM24Q9BX46 236 aaKnown RBP3.95□□□□□ -1.78
CCDC171-207ENST00000478913 REG4Q9BYZ8 158 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 OSBPL8Q9BZF1 889 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 TCEAL2Q9H3H9 227 aaPredicted RBP3.95□□□□□ -1.78
CCDC171-207ENST00000478913 MAGEF1Q9HAY2 307 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 FAM212BQ9NTI7 297 aaPredicted RBP3.95□□□□□ -1.78
CCDC171-207ENST00000478913 KLHL21Q9UJP4 597 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 EXOC7Q9UPT5 735 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 STYXL1Q9Y6J8 313 aa3.95□□□□□ -1.78
CCDC171-207ENST00000478913 LYSTQ99698 3801 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 ROS1P08922 2347 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 IGKV6-21A0A0C4DH24 114 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 TRBV5-4A0A0C4DH59 114 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 A0A1W2PRV1 198 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 ZBTB5O15062 677 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 CACNG3O60359 315 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 CHRNGP07510 517 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 NUDT17P0C025 328 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 MBL2P11226 248 aaPredicted RBP3.94□□□□□ -1.78
CCDC171-207ENST00000478913 KRTAP10-12P60413 245 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 MFGE8Q08431 387 aaPredicted RBP3.94□□□□□ -1.78
CCDC171-207ENST00000478913 LAMTOR4Q0VGL1 99 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 MEF2DQ14814 521 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 DMRTC1Q5HYR2 192 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 ARSKQ6UWY0 536 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 C17orf64Q86WR6 236 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 CARNMT1Q8N4J0 409 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 C4orf32Q8N8J7 132 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 OR1B1Q8NGR6 318 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 PSMA8Q8TAA3 256 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 CT55Q8WUE5 264 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 TCP11Q8WWU5 503 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 PIBF1Q8WXW3 757 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 PCED1BQ96HM7 432 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 AGPAT1Q99943 283 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 ULBP3Q9BZM4 244 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 MARCH7Q9H992 704 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 ELOVL2Q9NXB9 296 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 UXTQ9UBK9 157 aaPredicted RBP3.94□□□□□ -1.78
CCDC171-207ENST00000478913 CYTH4Q9UIA0 394 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.94□□□□□ -1.78
CCDC171-207ENST00000478913 MGAT4AQ9UM21 535 aa3.94□□□□□ -1.78
CCDC171-207ENST00000478913 NCOA6Q14686 2063 aaPredicted RBP3.93□□□□□ -1.78
CCDC171-207ENST00000478913 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 PSMD3O43242 534 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 KIAA0513O60268 411 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 GPRIN2O60269 458 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 GALR3O60755 368 aaPredicted RBP3.93□□□□□ -1.78
CCDC171-207ENST00000478913 OR6B1O95007 311 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 OR6A2O95222 327 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 CPNE6O95741 557 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 EPOP01588 193 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 STATHP02808 62 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 PVRP15151 417 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 GPX3P22352 226 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 GLRA1P23415 457 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 ID1P41134 155 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 SLC7A9P82251 487 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 HEPACAMQ14CZ8 416 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 AARDQ4LEZ3 155 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 HIGD2BQ4VC39 106 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 C9orf66Q5T8R8 295 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 TMUB2Q71RG4 321 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 NUFIP2Q7Z417 695 aaKnown RBP3.93□□□□□ -1.78
CCDC171-207ENST00000478913 PRSS42Q7Z5A4 293 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 UNC45BQ8IWX7 931 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms