RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GPM6BQ13491 265 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 RAPSNQ13702 412 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 MXD4Q14582 209 aaPredicted RBP3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 RFTN1Q14699 578 aaPredicted RBP3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 DCAF4L1Q3SXM0 396 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF506Q5JVG8 444 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 NIPAL3Q6P499 406 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 ABRAXAS1Q6UWZ7 409 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 ADAMTSL5Q6ZMM2 481 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 OTUD6AQ7L8S5 288 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 CDC20BQ86Y33 519 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 ECHDC2Q86YB7 292 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF573Q86YE8 665 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 CBWD2Q8IUF1 395 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 CENPSQ8N2Z9 138 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 FAM184AQ8NB25 1140 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 OR4F17Q8NGA8 305 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 ARNTL2Q8WYA1 636 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 ADIPOR1Q96A54 375 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 MTMR9Q96QG7 549 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 OR4F4Q96R69 305 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 GCOM2Q9BZD3 368 aaPredicted RBP3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 RAB34Q9BZG1 259 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 TRIM9Q9C026 710 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 TRIM6Q9C030 488 aaPredicted RBP3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 TMEM117Q9H0C3 514 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 KAT8Q9H7Z6 458 aaKnown RBP3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 UBE2ZQ9H832 354 aaPredicted RBP3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 AMBNQ9NP70 447 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 FAM114A2Q9NRY5 505 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 ABCC13Q9NSE7 274 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 AGPAT5Q9NUQ2 364 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 KLRF1Q9NZS2 232 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 GHRLQ9UBU3 117 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 ATP6V1HQ9UI12 483 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 MFHAS1Q9Y4C4 1052 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 EML5Q05BV3 1969 aa3.17□□□□□ -1.9
CDC42BPA-212ENST00000478573 FER1L5A0AVI2 2057 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 IGHV3OR16-12A0A075B7B8 117 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 WASH3PC4AMC7 463 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 H0YL77 283 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 H3BMH7 237 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 MCF2LO15068 1137 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 TYROBPO43914 113 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 ERLIN2O94905 339 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 RENP00797 406 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 IGHV3-13P01766 116 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 IGHV3-9P01782 118 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 MELTFP08582 738 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 HOXD4P09016 255 aaPredicted RBP3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 CALCBP10092 127 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 THRBP10828 461 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 HSD17B1P14061 328 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 TNNI3P19429 210 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 YWHABP31946 246 aaKnown RBP3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 PTGFRP43088 359 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 NAMPTP43490 491 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 STK19P49842 368 aaPredicted RBP3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 MFAP2P55001 183 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 MS4A2Q01362 244 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 EXOSC2Q13868 293 aaKnown RBP3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 TFDP1Q14186 410 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 CYBRD1Q53TN4 286 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF311Q5JNZ3 666 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 ACER2Q5QJU3 275 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 SEL1L3Q68CR1 1132 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 APOOLQ6UXV4 268 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 WASH2PQ6VEQ5 465 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 HACD2Q6Y1H2 254 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 TMEM184AQ6ZMB5 413 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF841Q6ZN19 808 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 GPRIN3Q6ZVF9 776 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 LHFPL4Q7Z7J7 247 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 SLC47A2Q86VL8 602 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 GPR65Q8IYL9 337 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 ARL14Q8N4G2 192 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 METTL13Q8N6R0 699 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 NECAB1Q8N987 351 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 FADS6Q8N9I5 356 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 ERMNQ8TAM6 284 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 FNDC8Q8TC99 324 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 CEP170P1Q96L14 293 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 VSTM2LQ96N03 204 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 TMEM175Q9BSA9 504 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 TIPINQ9BVW5 301 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF416Q9BWM5 594 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 CARD6Q9BX69 1037 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 NT5C3AQ9H0P0 336 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 ADNPQ9H2P0 1102 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 CWH43Q9H720 699 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 WDR76Q9H967 626 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 LPAR2Q9HBW0 351 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 POLD4Q9HCU8 107 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 ESM1Q9NQ30 184 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 XPNPEP1Q9NQW7 623 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 WRAP73Q9P2S5 460 aaPredicted RBP3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 B9D1Q9UPM9 204 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 RNF6Q9Y252 685 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 CSAG2Q9Y5P2 127 aa3.16□□□□□ -1.9
CDC42BPA-212ENST00000478573 BDP1A6H8Y1 2624 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms