RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZNF701M0R085 212 aaPredicted RBP2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 HAS3O00219 553 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 TRDMT1O14717 391 aaKnown RBP2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 ECDO95905 644 aaPredicted RBP2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 TGM6O95932 706 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 IGHV3-9P01782 118 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 CLTAP09496 248 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 TROVE2P10155 538 aaKnown RBP eCLIP2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 DBTP11182 482 aaKnown RBP2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 PVRP15151 417 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 HPGDP15428 266 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 LAP3P28838 519 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 MAGEA9P43362 315 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 NAMPTP43490 491 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 CCT3P49368 545 aaKnown RBP2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 TPMTP51580 245 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 CTAG1AP78358 180 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 MERTKQ12866 999 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 BNIP1Q12981 228 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 SLC10A1Q14973 349 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 CHRNA6Q15825 494 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 CDKN3Q16667 212 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 PARP6Q2NL67 630 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 MS4A13Q5J8X5 152 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 UTF1Q5T230 341 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 SEL1L2Q5TEA6 688 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 LIPNQ5VXI9 398 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 RAET1LQ5VY80 246 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 ATRAIDQ6UW56 229 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 SCARA5Q6ZMJ2 495 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 DPY19L2P2Q6ZN68 376 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 EIF3MQ7L2H7 374 aaKnown RBP2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 DPY19L4Q7Z388 723 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 GOLGA7Q7Z5G4 137 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 RANBP3LQ86VV4 465 aaPredicted RBP2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 TPRA1Q86W33 373 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 NFAM1Q8NET5 270 aaPredicted RBP2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 OR4K14Q8NGD5 310 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 LKAAEAR1Q8TD35 194 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 MITD1Q8WV92 249 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 SCFD1Q8WVM8 642 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 FAM3CQ92520 227 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 LHX4Q969G2 390 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 PRRC1Q96M27 445 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 CATSPER2Q96P56 530 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 TGM7Q96PF1 710 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 LLPHQ9BRT6 129 aaKnown RBP2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 APOOQ9BUR5 198 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 ANKRD60Q9BZ19 345 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 FBXO44Q9H4M3 255 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 RGCCQ9H4X1 137 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 FAM124BQ9H5Z6 455 aaPredicted RBP2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 DHX33Q9H6R0 707 aaKnown RBP2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 PARVGQ9HBI0 331 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 ZNF160Q9HCG1 818 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 LZTFL1Q9NQ48 299 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 UFSP2Q9NUQ7 469 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 SLC2A8Q9NY64 477 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 ADAM28Q9UKQ2 775 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 TBC1D24Q9ULP9 559 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 ZNF318Q5VUA4 2279 aa2.94□□□□□ -1.94
SMARCA1-204ENST00000478420 FAM168BA1KXE4 195 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 LRRC30A6NM36 301 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 CCT8L1PA6NM43 557 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 EFCAB7A8K855 629 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 H0YL77 283 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 BTN3A3O00478 584 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 TYROBPO43914 113 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 TSPAN12O95859 305 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 PGK1P00558 417 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 PGAM2P15259 253 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 ZNF3P17036 446 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 KLK2P20151 261 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 MSR1P21757 451 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 CASP4P49662 377 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 RAB9AP51151 201 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 C21orf59P57076 290 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 NOP14P78316 857 aaKnown RBP2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 PPIL2Q13356 520 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 HNRNPA1L2Q32P51 320 aaKnown RBP2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 GGTA1PQ4G0N0 100 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 ACSF3Q4G176 576 aaPredicted RBP2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 OR2A2Q6IF42 318 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 TMEM53Q6P2H8 277 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 RNASEKQ6P5S7 137 aaKnown RBP2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 C6orf89Q6UWU4 347 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 PAMR1Q6UXH9 720 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 ADAMTSL5Q6ZMM2 481 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 GCNT7Q6ZNI0 430 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 TSEN54Q7Z6J9 526 aaKnown RBP2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 ERICH1Q86X53 443 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 ALLCQ8N6M5 410 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 SYT14Q8NB59 555 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 FAM83FQ8NEG4 500 aaPredicted RBP2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 OR5AU1Q8NGC0 362 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 OR1L4Q8NGR5 311 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 OR13F1Q8NGS4 319 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 WDR36Q8NI36 951 aaKnown RBP2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 GLYATL2Q8WU03 294 aa2.93□□□□□ -1.94
SMARCA1-204ENST00000478420 TOP1MTQ969P6 601 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms