RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 GRINAQ7Z429 371 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 CLIP4Q8N3C7 705 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 BBS10Q8TAM1 723 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 C10orf82Q8WW14 230 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 C14orf79Q96F83 325 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 ANKRD27Q96NW4 1050 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 OR5B2Q96R09 309 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 CGREF1Q99674 301 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 TIGARQ9NQ88 270 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 SERINC1Q9NRX5 453 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 FOXD3Q9UJU5 478 aaPredicted RBP13.95□□□□□ -0.18
HMGA1-206ENST00000478214 ZNF232Q9UNY5 417 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 CORO2BQ9UQ03 480 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 CHST2Q9Y4C5 530 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 CSMD1Q96PZ7 3565 aa13.95□□□□□ -0.18
HMGA1-206ENST00000478214 FBP2O00757 339 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 MSTNO14793 375 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 PLGP00747 810 aaPredicted RBP13.94□□□□□ -0.18
HMGA1-206ENST00000478214 CGAP01215 116 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 SSTR2P30874 369 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 APOBEC1P41238 236 aaKnown RBP13.94□□□□□ -0.18
HMGA1-206ENST00000478214 MTPNP58546 118 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 CDK6Q00534 326 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 TLE4Q04727 773 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 MYBPHQ13203 477 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 CAPRIN1Q14444 709 aaKnown RBP13.94□□□□□ -0.18
HMGA1-206ENST00000478214 ADRM1Q16186 407 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 ZNF311Q5JNZ3 666 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 RNF220Q5VTB9 566 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 REEP3Q6NUK4 255 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 FAM214BQ7L5A3 538 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 ADGRG3Q86Y34 549 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 ZNF440Q8IYI8 595 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 CPNE4Q96A23 557 aaPredicted RBP13.94□□□□□ -0.18
HMGA1-206ENST00000478214 GMPPAQ96IJ6 420 aaPredicted RBP13.94□□□□□ -0.18
HMGA1-206ENST00000478214 SPATA9Q9BWV2 254 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 RSPO3Q9BXY4 272 aaPredicted RBP13.94□□□□□ -0.18
HMGA1-206ENST00000478214 OPN3Q9H1Y3 402 aaPredicted RBP13.94□□□□□ -0.18
HMGA1-206ENST00000478214 TMEM38AQ9H6F2 299 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 CACYBPQ9HB71 228 aaKnown RBP13.94□□□□□ -0.18
HMGA1-206ENST00000478214 GALNT8Q9NY28 637 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 KCNN3Q9UGI6 736 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 CHRNA9Q9UGM1 479 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 IFT52Q9Y366 437 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 LRBAP50851 2863 aa13.94□□□□□ -0.18
HMGA1-206ENST00000478214 FAAHO00519 579 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 SS18L1O75177 396 aaPredicted RBP13.93□□□□□ -0.18
HMGA1-206ENST00000478214 PABPC4LP0CB38 370 aaKnown RBP13.93□□□□□ -0.18
HMGA1-206ENST00000478214 TFPIP10646 304 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 PRG2P13727 222 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 ETS2P15036 469 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 CCNA2P20248 432 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 CPOXP36551 454 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 ACAA2P42765 397 aaKnown RBP13.93□□□□□ -0.18
HMGA1-206ENST00000478214 KIR2DL3P43628 341 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 RAC3P60763 192 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 SYT14P1Q58G82 188 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 ZNF474Q6S9Z5 364 aaPredicted RBP13.93□□□□□ -0.18
HMGA1-206ENST00000478214 KIF18BQ86Y91 864 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 ZZZ3Q8IYH5 903 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 RNF128Q8TEB7 428 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 ABHD3Q8WU67 409 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 SLC25A43Q8WUT9 341 aaPredicted RBP13.93□□□□□ -0.18
HMGA1-206ENST00000478214 DNAJA3Q96EY1 480 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 REXO5Q96IC2 774 aaKnown RBP13.93□□□□□ -0.18
HMGA1-206ENST00000478214 SLC24A3Q9HC58 644 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 MRGBPQ9NV56 204 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 CRIM1Q9NZV1 1036 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 OSGIN1Q9UJX0 560 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 EMC9Q9Y3B6 208 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 TACC2O95359 2948 aa13.93□□□□□ -0.18
HMGA1-206ENST00000478214 TMED7-TICAM2A0A0A6YYA0 188 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 IGHV3-15A0A0B4J1V0 119 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 FRS3O43559 492 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 CD8BP10966 210 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 UQCRBP14927 111 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 KLK2P20151 261 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 ENPP1P22413 925 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 SLC6A2P23975 617 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 TACR3P29371 465 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 SLC1A3P43003 542 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 HTR3AP46098 478 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 POLR2HP52434 150 aaKnown RBP13.92□□□□□ -0.18
HMGA1-206ENST00000478214 CTBP2P56545 445 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 KRTAP10-9P60411 292 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 SCARB2Q14108 478 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 ZSWIM7Q19AV6 140 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 TRMT5Q32P41 509 aaKnown RBP13.92□□□□□ -0.18
HMGA1-206ENST00000478214 TMPPEQ6ZT21 453 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 FCRLAQ7L513 359 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 ZNF550Q7Z398 422 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 SERPINA11Q86U17 422 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 SNX32Q86XE0 403 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 PTOV1Q86YD1 416 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 ZNF610Q8N9Z0 462 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 LINC01560Q8TB33 94 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 ZNF559Q9BR84 538 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 SLC39A3Q9BRY0 314 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 OR11A1Q9GZK7 315 aa13.92□□□□□ -0.18
HMGA1-206ENST00000478214 ADAM19Q9H013 955 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms