RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 POU4F2Q12837 409 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 FOXD4Q12950 439 aaPredicted RBP7.28□□□□□ -1.24
VMA21-203ENST00000477649 DCTN2Q13561 401 aaKnown RBP7.28□□□□□ -1.24
VMA21-203ENST00000477649 SPHARQ15513 63 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 ELOA3BQ3SY89 546 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 ARMCX4Q5H9R4 360 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 PHF19Q5T6S3 580 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 PWWP2BQ6NUJ5 590 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 MRPL14Q6P1L8 145 aaKnown RBP7.28□□□□□ -1.24
VMA21-203ENST00000477649 ZC3H14Q6PJT7 736 aaKnown RBP7.28□□□□□ -1.24
VMA21-203ENST00000477649 KIRREL2Q6UWL6 708 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 DPY19L2P2Q6ZN68 376 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 SLC16A12Q6ZSM3 486 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 USP43Q70EL4 1123 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 C9orf40Q8IXQ3 194 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 DND1Q8IYX4 353 aaKnown RBP7.28□□□□□ -1.24
VMA21-203ENST00000477649 CADM2Q8N3J6 435 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 IQCF1Q8N6M8 205 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 AMER2Q8N7J2 671 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 NANOGP1Q8N7R0 232 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 NFAM1Q8NET5 270 aaPredicted RBP7.28□□□□□ -1.24
VMA21-203ENST00000477649 ELOA3Q8NG57 546 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 OR8D4Q8NGM9 314 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 OR6S1Q8NH40 331 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 RNF217Q8TC41 542 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 PHOSPHO1Q8TCT1 267 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 GRHL3Q8TE85 626 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 DOK4Q8TEW6 326 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 S100ZQ8WXG8 99 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 TMEM234Q8WY98 164 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 C3orf49Q96BT1 292 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 TMCO6Q96DC7 493 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 LGALS12Q96DT0 336 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 OMA1Q96E52 524 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 ARSGQ96EG1 525 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 RNFT2Q96EX2 444 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 MRPL48Q96GC5 212 aaKnown RBP7.28□□□□□ -1.24
VMA21-203ENST00000477649 SAMD8Q96LT4 415 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 GAL3ST4Q96RP7 486 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 GPX7Q96SL4 187 aaPredicted RBP7.28□□□□□ -1.24
VMA21-203ENST00000477649 MGLLQ99685 303 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 CMKLR1Q99788 373 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 DPH1Q9BZG8 443 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 TBL1XR1Q9BZK7 514 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 PLA2G12AQ9BZM1 189 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 STRADBQ9C0K7 418 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 PLGRKTQ9HBL7 147 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 AMBNQ9NP70 447 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 SLC22A11Q9NSA0 550 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 HAO2Q9NYQ3 351 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 DNAJC27Q9NZQ0 273 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 CTSFQ9UBX1 484 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 AASSQ9UDR5 926 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 EXOGQ9Y2C4 368 aaKnown RBP7.28□□□□□ -1.24
VMA21-203ENST00000477649 NTNG1Q9Y2I2 539 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 CCDC88CQ9P219 2028 aa7.28□□□□□ -1.24
VMA21-203ENST00000477649 LOC102723996A0A087X1L8 192 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 A8MUA0 341 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 PRR23D1E9PI22 279 aaPredicted RBP7.27□□□□□ -1.25
VMA21-203ENST00000477649 CDC42EP2O14613 210 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 OR7A10O76100 309 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 MT-ATP6P00846 226 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 LCKP06239 509 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 IGFBP1P08833 259 aaPredicted RBP7.27□□□□□ -1.25
VMA21-203ENST00000477649 PRR23D2P0DMB1 279 aaPredicted RBP7.27□□□□□ -1.25
VMA21-203ENST00000477649 CDK4P11802 303 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 CD53P19397 219 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 MAKP20794 623 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 GALP22466 123 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 PSMA1P25786 263 aaKnown RBP7.27□□□□□ -1.25
VMA21-203ENST00000477649 ABCD3P28288 659 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 TGFBR2P37173 567 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 P2RX1P51575 399 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 DLX5P56178 289 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 WNT4P56705 351 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 ACTC1P68032 377 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 ACTA1P68133 377 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 BDH1Q02338 343 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 CRYZQ08257 329 aaKnown RBP7.27□□□□□ -1.25
VMA21-203ENST00000477649 ACSM1Q08AH1 577 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 C17orf67Q0P5P2 114 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 GPR50Q13585 617 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 IL10RAQ13651 578 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 CBFBQ13951 182 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 MFSD13AQ14CX5 517 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 MED22Q15528 200 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 EXT1Q16394 746 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 ZNF829Q3KNS6 432 aaPredicted RBP7.27□□□□□ -1.25
VMA21-203ENST00000477649 EMC4Q5J8M3 183 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 LCN1P1Q5VSP4 162 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 PRAMEF17Q5VTA0 474 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 SLC30A6Q6NXT4 461 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 PAPD4Q6PIY7 484 aaKnown RBP7.27□□□□□ -1.25
VMA21-203ENST00000477649 WDR88Q6ZMY6 472 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 MEPCEQ7L2J0 689 aaKnown RBP7.27□□□□□ -1.25
VMA21-203ENST00000477649 CXXC5Q7LFL8 322 aaKnown RBP7.27□□□□□ -1.25
VMA21-203ENST00000477649 TMPRSS9Q7Z410 1059 aa7.27□□□□□ -1.25
VMA21-203ENST00000477649 CPEB2Q7Z5Q1 589 aaKnown RBP7.27□□□□□ -1.25
VMA21-203ENST00000477649 ATG4DQ86TL0 474 aaPredicted RBP7.27□□□□□ -1.25
VMA21-203ENST00000477649 SHISA5Q8N114 240 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms