RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 OTOFQ9HC10 1997 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 A0A1W2PQ72 361 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 C2orf72A6NCS6 295 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 RORAP35398 523 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 TNFRSF4P43489 277 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 ATXN7L3Q14CW9 347 aaPredicted RBP10.23□□□□□ -0.77
COL27A1-204ENST00000477421 MRPL38Q96DV4 380 aaKnown RBP10.23□□□□□ -0.77
COL27A1-204ENST00000477421 PDCD1LG2Q9BQ51 273 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 OR10A4Q9H209 315 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 POT1Q9NUX5 634 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 LRIT1Q9P2V4 623 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 EXO1Q9UQ84 846 aaKnown RBP10.23□□□□□ -0.77
COL27A1-204ENST00000477421 FXYD6-FXYD2A0A087WZ82 144 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 TEX13CA0A0J9YWL9 993 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 FFAR1O14842 300 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 EML2O95834 649 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 HEXBP07686 556 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 CLUP10909 449 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 CHRNB1P11230 501 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 CD38P28907 300 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 LPAL2Q16609 132 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 AKIRIN2Q53H80 203 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 C3orf38Q5JPI3 329 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 C1orf94Q6P1W5 598 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 SLC35D2Q76EJ3 337 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 GDPD3Q7L5L3 318 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 CAMKMTQ7Z624 323 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 TMEM156Q8N614 296 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 OR4D11Q8NGI4 311 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 OR51Q1Q8NH59 317 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 FXYD6Q9H0Q3 95 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 FBXO34Q9NWN3 711 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 ZNF224Q9NZL3 707 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 CBLCQ9ULV8 474 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 RABL2BQ9UNT1 228 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 TDRD6O60522 2096 aaKnown RBP10.22□□□□□ -0.77
COL27A1-204ENST00000477421 TMEM72A0PK05 275 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 HRO43593 1189 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 SLC19A2O60779 497 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 SOD1P00441 154 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 PSMA3P25788 255 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 PRKAR1BP31321 381 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 GRK5P34947 590 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 RPS5P46782 204 aaKnown RBP10.22□□□□□ -0.77
COL27A1-204ENST00000477421 PRKXP51817 358 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 SNRPGP62308 76 aaKnown RBP10.22□□□□□ -0.77
COL27A1-204ENST00000477421 GALK2Q01415 458 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 TFF2Q03403 129 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 CHAF1BQ13112 559 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 FGL2Q14314 439 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 LRRC37A5PQ49AS3 106 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 FAM69BQ5VUD6 431 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 OLFML2AQ68BL7 652 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 SLC35F2Q8IXU6 374 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 KDM8Q8N371 416 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 FAM26EQ8N5C1 309 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 TMEM99Q8N816 258 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 OR4N2Q8NGD1 307 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 THAP7Q9BT49 309 aaPredicted RBP10.22□□□□□ -0.77
COL27A1-204ENST00000477421 CDCA4Q9BXL8 241 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 C11orf54Q9H0W9 315 aaPredicted RBP10.22□□□□□ -0.77
COL27A1-204ENST00000477421 MUTYHQ9UIF7 546 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 YBX2Q9Y2T7 364 aaKnown RBP10.22□□□□□ -0.77
COL27A1-204ENST00000477421 LOC285556D6RIA3 1793 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 GPR179Q6PRD1 2367 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 TSPAN11A1L157 253 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 DCDC2BA2VCK2 349 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 CDHR4A6H8M9 788 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 SYT5O00445 386 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 NARSO43776 548 aaKnown RBP10.22□□□□□ -0.77
COL27A1-204ENST00000477421 SDHBP21912 280 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 VAMP1P23763 118 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 GABRA5P31644 462 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 PPP1CAP62136 330 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 TMEM225Q6GV28 225 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 CCDC80Q76M96 950 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 SIMC1Q8NDZ2 872 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 GOT1L1Q8NHS2 421 aaPredicted RBP10.22□□□□□ -0.77
COL27A1-204ENST00000477421 ITFG2Q969R8 447 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 PPP1R14AQ96A00 147 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 ORAI1Q96D31 301 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 TTYH1Q9H313 450 aaPredicted RBP10.22□□□□□ -0.77
COL27A1-204ENST00000477421 FBRSQ9HAH7 460 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 AKIP1Q9NQ31 210 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 WBP1LQ9NX94 342 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 SESN1Q9Y6P5 492 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 A0A0A6YYD5 115 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 DUX1O43812 170 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 MYF5P13349 255 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 TRHRP34981 398 aaPredicted RBP10.22□□□□□ -0.77
COL27A1-204ENST00000477421 GMFBP60983 142 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 C19orf47Q8N9M1 422 aaKnown RBP10.22□□□□□ -0.77
COL27A1-204ENST00000477421 OR4K17Q8NGC6 315 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 RASD2Q96D21 266 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 ZNF486Q96H40 463 aaPredicted RBP10.22□□□□□ -0.77
COL27A1-204ENST00000477421 CMKLR1Q99788 373 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 SIAEQ9HAT2 523 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 PLCL2Q9UPR0 1127 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 SATB2Q9UPW6 733 aa10.22□□□□□ -0.77
COL27A1-204ENST00000477421 MRPS2Q9Y399 296 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms