RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 OR11A1Q9GZK7 315 aa14.3□□□□□ -0.12
COPS3-207ENST00000477299 PRDM14Q9GZV8 571 aa14.3□□□□□ -0.12
COPS3-207ENST00000477299 HHATLQ9HCP6 504 aa14.3□□□□□ -0.12
COPS3-207ENST00000477299 DCAF13Q9NV06 445 aaKnown RBP14.3□□□□□ -0.12
COPS3-207ENST00000477299 PRPF19Q9UMS4 504 aaKnown RBP14.3□□□□□ -0.12
COPS3-207ENST00000477299 TMED7-TICAM2A0A0A6YYA0 188 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 A0A1B0GWA3 101 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 A0A1W2PNR3 127 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 ZC3H12DA2A288 527 aaKnown RBP14.29□□□□□ -0.12
COPS3-207ENST00000477299 OR14I1A6ND48 311 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 CPSF4LA6NMK7 179 aaKnown RBP14.29□□□□□ -0.12
COPS3-207ENST00000477299 FAAHO00519 579 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 DNAJC8O75937 253 aaPredicted RBP14.29□□□□□ -0.12
COPS3-207ENST00000477299 PRKD3O94806 890 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 LYPD3O95274 346 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 C8BP07358 591 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 ZNF17P17021 662 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 POU3F2P20265 443 aaPredicted RBP14.29□□□□□ -0.12
COPS3-207ENST00000477299 SLC1A3P43003 542 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 YAP1P46937 504 aaKnown RBP14.29□□□□□ -0.12
COPS3-207ENST00000477299 SRSF1Q07955 248 aaKnown RBP eCLIP14.29□□□□□ -0.12
COPS3-207ENST00000477299 OR1Q1Q15612 314 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 ZSWIM7Q19AV6 140 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 CTU2Q2VPK5 515 aaKnown RBP14.29□□□□□ -0.12
COPS3-207ENST00000477299 TMEM176BQ3YBM2 270 aaPredicted RBP14.29□□□□□ -0.12
COPS3-207ENST00000477299 WBP2NLQ6ICG8 309 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 P3H2Q8IVL5 708 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 ULK2Q8IYT8 1036 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 LILRA2Q8N149 483 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 MARVELD2Q8N4S9 558 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 TNIP2Q8NFZ5 429 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 TMEM234Q8WY98 164 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 AMBRA1Q9C0C7 1298 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 ARMC7Q9H6L4 198 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 GORASP2Q9H8Y8 452 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 KLHL28Q9NXS3 571 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 SLC13A4Q9UKG4 626 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 TMED7Q9Y3B3 224 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 FAM215AQ9Y5M1 114 aa14.29□□□□□ -0.12
COPS3-207ENST00000477299 J3KTA2 159 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 EBAG9O00559 213 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 BCKDKO14874 412 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 LRRTM2O43300 516 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 STSP08842 583 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 CPN1P15169 458 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 KLK2P20151 261 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 ADH6P28332 368 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 EIF1P41567 113 aaKnown RBP14.28□□□□□ -0.12
COPS3-207ENST00000477299 CA7P43166 264 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 RAC1P63000 192 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 RBPJQ06330 500 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 TRIM25Q14258 630 aaKnown RBP14.28□□□□□ -0.12
COPS3-207ENST00000477299 ENTPD8Q5MY95 495 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 WLSQ5T9L3 541 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 AAGABQ6PD74 315 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 DEF8Q6ZN54 512 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 CCDC121Q6ZUS5 278 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 SEM1Q6ZVN7 128 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 GRINAQ7Z429 371 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 FJX1Q86VR8 437 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 BHLHE22Q8NFJ8 381 aaPredicted RBP14.28□□□□□ -0.12
COPS3-207ENST00000477299 PHF10Q8WUB8 498 aaKnown RBP14.28□□□□□ -0.12
COPS3-207ENST00000477299 PROX1Q92786 737 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 SLC35B4Q969S0 331 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 ADGRG7Q96K78 797 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 ARL5BQ96KC2 179 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 BAG5Q9UL15 447 aa14.28□□□□□ -0.12
COPS3-207ENST00000477299 INTS1Q8N201 2190 aaKnown RBP14.27□□□□□ -0.12
COPS3-207ENST00000477299 NCOA6Q14686 2063 aaPredicted RBP14.27□□□□□ -0.12
COPS3-207ENST00000477299 TCRBV5S2A0A599 114 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 J3QKU1 62 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 EIF1AYO14602 144 aaKnown RBP14.27□□□□□ -0.13
COPS3-207ENST00000477299 PRRG2O14669 202 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 ACOT8O14734 319 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 TNFSF11O14788 317 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 ATP5HO75947 161 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 IFNA14P01570 189 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 APOBEC1P41238 236 aaKnown RBP14.27□□□□□ -0.13
COPS3-207ENST00000477299 ERFP50548 548 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 POLR2HP52434 150 aaKnown RBP14.27□□□□□ -0.13
COPS3-207ENST00000477299 CDH12P55289 794 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 COPZ1P61923 177 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 PIN1Q13526 163 aaPredicted RBP14.27□□□□□ -0.13
COPS3-207ENST00000477299 SPATS1Q496A3 300 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 DNAL1Q4LDG9 190 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 RPTNQ6XPR3 784 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 WDR88Q6ZMY6 472 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 ATG4DQ86TL0 474 aaPredicted RBP14.27□□□□□ -0.13
COPS3-207ENST00000477299 ARHGAP24Q8N264 748 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 LSMEM1Q8N8F7 131 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 RASSF5Q8WWW0 418 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 UTP4Q969X6 686 aaKnown RBP14.27□□□□□ -0.13
COPS3-207ENST00000477299 NSMCE2Q96MF7 247 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 ZNF559Q9BR84 538 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 TRIM2Q9C040 744 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 COQ10BQ9H8M1 238 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 ADPRHL2Q9NX46 363 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 ACTR3BQ9P1U1 418 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 RHCGQ9UBD6 479 aa14.27□□□□□ -0.13
COPS3-207ENST00000477299 MAGEL2Q9UJ55 1249 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms