RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 EFNB1P98172 346 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 GALK2Q01415 458 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 SEMG2Q02383 582 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 HSF2Q03933 536 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 CSTF1Q05048 431 aaKnown RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 MGAT3Q09327 533 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TMEM115Q12893 351 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 EMC2Q15006 297 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 PDK3Q15120 406 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TAF1AQ15573 450 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 GSTA3Q16772 222 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 GUK1Q16774 197 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 IMPG1Q17R60 797 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 EXOC3L4Q17RC7 722 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 BSXQ3C1V8 233 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ANKRD55Q3KP44 614 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ZSCAN23Q3MJ62 389 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 UGT3A2Q3SY77 523 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ASPRV1Q53RT3 343 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TMEM41BQ5BJD5 291 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ZNF789Q5FWF6 425 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TNFAIP8L3Q5GJ75 292 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 SLC25A53Q5H9E4 307 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 C6orf136Q5SQH8 315 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 MARC1Q5VT66 337 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 PRAMEF8Q5VWM4 474 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 MEDAGQ5VYS4 303 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 SEL1L3Q68CR1 1132 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 KRT39Q6A163 491 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TIGD3Q6B0B8 471 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 CYB5R2Q6BCY4 276 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 KIAA0930Q6ICG6 404 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 ZSCAN25Q6NSZ9 544 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 FAM199XQ6PEV8 388 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 LRRN1Q6UXK5 716 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ASCL4Q6XD76 172 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 GDPD3Q7L5L3 318 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ARCQ7LC44 396 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 SSX9Q7RTT3 188 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 HDDC2Q7Z4H3 204 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 NET1Q7Z628 596 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 LYG2Q86SG7 212 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 LUZP2Q86TE4 346 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 PHF13Q86YI8 300 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 RBM45Q8IUH3 476 aaKnown RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 KLHL7Q8IXQ5 586 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 MICU2Q8IYU8 434 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 STK40Q8N2I9 435 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 LRRC18Q8N456 261 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 NECAB1Q8N987 351 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 CCDC71LQ8N9Z2 235 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 GATSQ8NAP1 163 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 COLGALT1Q8NBJ5 622 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 FBXL13Q8NEE6 735 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TMEM185AQ8NFB2 350 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 STXBP6Q8NFX7 210 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 OR56B1Q8NGI3 324 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 OR52H1Q8NGJ2 320 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 OR5M8Q8NGP6 311 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 OR13C9Q8NGT0 318 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TBC1D16Q8TBP0 767 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 CA5BP1Q8WTZ4 195 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 FAM172AQ8WUF8 416 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 NAT14Q8WUY8 206 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ZNRF4Q8WWF5 429 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 GTF2H4Q92759 462 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 DNASE1L2Q92874 299 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 UFD1Q92890 307 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 EXOSC8Q96B26 276 aaKnown RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 SPSB1Q96BD6 273 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 SNRNP40Q96DI7 357 aaKnown RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 BSCL2Q96G97 398 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 PGAM5Q96HS1 289 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 CPB2Q96IY4 423 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 PRAC1Q96KF2 57 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 PRAP1Q96NZ9 151 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 WDFY2Q96P53 400 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 BTBD9Q96Q07 612 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 LGMNQ99538 433 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 OMDQ99983 421 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 INPP5KQ9BT40 448 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 HINT2Q9BX68 163 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 YTHDF1Q9BYJ9 559 aaKnown RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 IL22Q9GZX6 179 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 TTYH1Q9H313 450 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 NXF3Q9H4D5 531 aaKnown RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 RANBP3Q9H6Z4 567 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 NOL11Q9H8H0 719 aaKnown RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 C10orf88Q9H8K7 445 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ANKRA2Q9H9E1 313 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 COG4Q9H9E3 785 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 VAT1LQ9HCJ6 419 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 CD209Q9NNX6 404 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 CTPS2Q9NRF8 586 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 YAE1D1Q9NRH1 226 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ABCB10Q9NRK6 738 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 SLC38A7Q9NVC3 462 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 BEX4Q9NWD9 120 aaPredicted RBP2.2□□□□□ -2.06
XRN1-211ENST00000477237 TAS2R9Q9NYW1 312 aa2.2□□□□□ -2.06
XRN1-211ENST00000477237 ADA2Q9NZK5 511 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms