RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 TMEM38AQ9H6F2 299 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 EXOSC3Q9NQT5 275 aaKnown RBP11.14□□□□□ -0.63
APTX-220ENST00000476858 CMTM6Q9NX76 183 aa11.14□□□□□ -0.63
APTX-220ENST00000476858 GPC6Q9Y625 555 aaPredicted RBP11.14□□□□□ -0.63
APTX-220ENST00000476858 TMEM72A0PK05 275 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 HSPB2A8KAH6 182 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 TMEM229AB2RXF0 380 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 FAM47E-STBD1D6RA91 191 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 RAMP1O60894 148 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 IL2RAP01589 272 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 PGCP20142 388 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 PTNP21246 168 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 ENPP1P22413 925 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 SLC6A2P23975 617 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 CTSSP25774 331 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 HTR2AP28223 471 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 PCBP3P57721 371 aaKnown RBP11.13□□□□□ -0.63
APTX-220ENST00000476858 CYLC2Q14093 348 aaPredicted RBP11.13□□□□□ -0.63
APTX-220ENST00000476858 HSPB2Q16082 182 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 LIN52Q52LA3 116 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 ZNF311Q5JNZ3 666 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 REEP3Q6NUK4 255 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 BTLAQ7Z6A9 289 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 PIGWQ7Z7B1 504 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 TSPYL5Q86VY4 417 aaPredicted RBP11.13□□□□□ -0.63
APTX-220ENST00000476858 RBM45Q8IUH3 476 aaKnown RBP11.13□□□□□ -0.63
APTX-220ENST00000476858 ZNF563Q8TA94 476 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 BBS10Q8TAM1 723 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 ST8SIA1Q92185 356 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 STARD4Q96DR4 205 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 SPATA9Q9BWV2 254 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 OPN3Q9H1Y3 402 aaPredicted RBP11.13□□□□□ -0.63
APTX-220ENST00000476858 RAD21L1Q9H4I0 556 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 RNF122Q9H9V4 155 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 KCNJ16Q9NPI9 418 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 JKAMPQ9P055 326 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 OSGIN1Q9UJX0 560 aa11.13□□□□□ -0.63
APTX-220ENST00000476858 ING1Q9UK53 422 aaPredicted RBP11.13□□□□□ -0.63
APTX-220ENST00000476858 CFAP73A6NFT4 308 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 EVPLLA8MZ36 301 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 C5orf58C9J3I9 102 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 LINC01387J3KSC0 135 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 AIM2O14862 343 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 MFN2O95140 757 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 CGAP01215 116 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 THBS1P07996 1170 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 CD247P20963 164 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 PPIBP23284 216 aaKnown RBP11.12□□□□□ -0.63
APTX-220ENST00000476858 ELK4P28324 431 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 ADH6P28332 368 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 TACR3P29371 465 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 EIF1P41567 113 aaKnown RBP11.12□□□□□ -0.63
APTX-220ENST00000476858 CPA2P48052 419 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 NPTX1Q15818 432 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 SGCBQ16585 318 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 ZNF239Q16600 458 aaKnown RBP11.12□□□□□ -0.63
APTX-220ENST00000476858 CYP51A1Q16850 503 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 RNF220Q5VTB9 566 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 MEX3BQ6ZN04 569 aaKnown RBP11.12□□□□□ -0.63
APTX-220ENST00000476858 P4HA3Q7Z4N8 544 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 CPLX4Q7Z7G2 160 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 LUZP2Q86TE4 346 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 CMIPQ8IY22 773 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 CADM2Q8N3J6 435 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 ABHD3Q8WU67 409 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 ZNF775Q96BV0 537 aaPredicted RBP11.12□□□□□ -0.63
APTX-220ENST00000476858 TAMM41Q96BW9 452 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 ZNF583Q96ND8 569 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 OR5B2Q96R09 309 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 GPATCH1Q9BRR8 931 aaKnown RBP11.12□□□□□ -0.63
APTX-220ENST00000476858 ENKD1Q9H0I2 346 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 CALML5Q9NZT1 146 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 PACSIN3Q9UKS6 424 aa11.12□□□□□ -0.63
APTX-220ENST00000476858 TMED7-TICAM2A0A0A6YYA0 188 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 EEF1E1-BLOC1S5C9J1V9 151 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 M0QX08 132 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 M0R3H8 397 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 SMAD9O15198 467 aaKnown RBP11.11□□□□□ -0.63
APTX-220ENST00000476858 EEF1E1O43324 174 aaKnown RBP11.11□□□□□ -0.63
APTX-220ENST00000476858 IMPDH2P12268 514 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 ETS2P15036 469 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 TNFRSF1BP20333 461 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 FUT4P22083 530 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 PCGF2P35227 344 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 CARD18P57730 90 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 KRTAP10-9P60411 292 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 SELENBP1Q13228 472 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 DUSP7Q16829 419 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 MMEL1Q495T6 779 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 COQ5Q5HYK3 327 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 PRAMEF8Q5VWM4 474 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 PRAMEF7Q5VXH5 474 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 C8orf82Q6P1X6 216 aaPredicted RBP11.11□□□□□ -0.63
APTX-220ENST00000476858 DHRS4L2Q6PKH6 230 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 ZNF474Q6S9Z5 364 aaPredicted RBP11.11□□□□□ -0.63
APTX-220ENST00000476858 ESPNLQ6ZVH7 1005 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.11□□□□□ -0.63
APTX-220ENST00000476858 NUFIP2Q7Z417 695 aaKnown RBP11.11□□□□□ -0.63
APTX-220ENST00000476858 P3H2Q8IVL5 708 aa11.11□□□□□ -0.63
APTX-220ENST00000476858 CNEP1R1Q8N9A8 125 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms