RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 CAPRIN1Q14444 709 aaKnown RBP12.19□□□□□ -0.46
RAB5A-208ENST00000476544 ZNF239Q16600 458 aaKnown RBP12.19□□□□□ -0.46
RAB5A-208ENST00000476544 GLIPR1L2Q4G1C9 344 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 HSP90B2PQ58FF3 399 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 PRAMEF8Q5VWM4 474 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 PRAMEF7Q5VXH5 474 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 OR2A2Q6IF42 318 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 TMPPEQ6ZT21 453 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 FAM214BQ7L5A3 538 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 NUFIP2Q7Z417 695 aaKnown RBP12.19□□□□□ -0.46
RAB5A-208ENST00000476544 PEX5LQ8IYB4 626 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 CNEP1R1Q8N9A8 125 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 ABHD3Q8WU67 409 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 SPATA9Q9BWV2 254 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 RBM24Q9BX46 236 aaKnown RBP12.19□□□□□ -0.46
RAB5A-208ENST00000476544 OR11A1Q9GZK7 315 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 PIGMQ9H3S5 423 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 TMEM38AQ9H6F2 299 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 KAT8Q9H7Z6 458 aaKnown RBP12.19□□□□□ -0.46
RAB5A-208ENST00000476544 GALNT8Q9NY28 637 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 CALML5Q9NZT1 146 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 STOML1Q9UBI4 398 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 KCNN3Q9UGI6 736 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 LEF1Q9UJU2 399 aaPredicted RBP12.19□□□□□ -0.46
RAB5A-208ENST00000476544 PACSIN3Q9UKS6 424 aa12.19□□□□□ -0.46
RAB5A-208ENST00000476544 ZNF443Q9Y2A4 671 aaPredicted RBP12.19□□□□□ -0.46
RAB5A-208ENST00000476544 OTOGQ6ZRI0 2925 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 LOC100653049A0A140TA62 436 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 TMEM72A0PK05 275 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 ZC3H12DA2A288 527 aaKnown RBP12.18□□□□□ -0.46
RAB5A-208ENST00000476544 SMAD9O15198 467 aaKnown RBP12.18□□□□□ -0.46
RAB5A-208ENST00000476544 FRS3O43559 492 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 TPST2O60704 377 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 RAMP1O60894 148 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 KRT34O76011 436 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 THBS1P07996 1170 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 PABPC4LP0CB38 370 aaKnown RBP12.18□□□□□ -0.46
RAB5A-208ENST00000476544 TROVE2P10155 538 aaKnown RBP eCLIP12.18□□□□□ -0.46
RAB5A-208ENST00000476544 CD8BP10966 210 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 IMPDH2P12268 514 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 ETS2P15036 469 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 CCNA2P20248 432 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 ME2P23368 584 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 TACR3P29371 465 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 SSTR2P30874 369 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 SLC1A3P43003 542 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 KIR2DL3P43628 341 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 HPCAP84074 193 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 CDK6Q00534 326 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 SELENBP1Q13228 472 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 DAZAP2Q15038 168 aaPredicted RBP12.18□□□□□ -0.46
RAB5A-208ENST00000476544 GCNT6Q5T4J0 391 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 EEF1A1P5Q5VTE0 462 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 NANOGP8Q6NSW7 305 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 GRINAQ7Z429 371 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 SERPINA11Q86U17 422 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 RNF128Q8TEB7 428 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 TMEM234Q8WY98 164 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 DNAJA3Q96EY1 480 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 LURAP1Q96LR2 239 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 OR5B2Q96R09 309 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 SLC39A3Q9BRY0 314 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 NANOGQ9H9S0 305 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 MCCC2Q9HCC0 563 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 PAQR5Q9NXK6 330 aaPredicted RBP12.18□□□□□ -0.46
RAB5A-208ENST00000476544 KLHL14Q9P2G3 628 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.18□□□□□ -0.46
RAB5A-208ENST00000476544 SPG11Q96JI7 2443 aa12.18□□□□□ -0.46
RAB5A-208ENST00000476544 TMED7-TICAM2A0A0A6YYA0 188 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 CTAG2O75638 210 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 SMNDC1O75940 238 aaKnown RBP eCLIP12.17□□□□□ -0.46
RAB5A-208ENST00000476544 MFN2O95140 757 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 PCYT1AP49585 367 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 DIO1P49895 249 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 CRYBA2P53672 197 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 PCBP3P57721 371 aaKnown RBP12.17□□□□□ -0.46
RAB5A-208ENST00000476544 MTPNP58546 118 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 H3F3AP84243 136 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 DMTNQ08495 405 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 ZNF311Q5JNZ3 666 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 RNF220Q5VTB9 566 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 REEP3Q6NUK4 255 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 GDF7Q7Z4P5 450 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 NET1Q7Z628 596 aaPredicted RBP12.17□□□□□ -0.46
RAB5A-208ENST00000476544 DHDDSQ86SQ9 333 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 CALHM3Q86XJ0 350 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 TUSC5Q8IXB3 177 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 ZZZ3Q8IYH5 903 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 ZNF563Q8TA94 476 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 ZNF775Q96BV0 537 aaPredicted RBP12.17□□□□□ -0.46
RAB5A-208ENST00000476544 GMPPAQ96IJ6 420 aaPredicted RBP12.17□□□□□ -0.46
RAB5A-208ENST00000476544 WFIKKN1Q96NZ8 548 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 RAD21L1Q9H4I0 556 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 ARMCX1Q9P291 453 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 CHRNA9Q9UGM1 479 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 FOXD3Q9UJU5 478 aaPredicted RBP12.17□□□□□ -0.46
RAB5A-208ENST00000476544 ZNF232Q9UNY5 417 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 USP22Q9UPT9 525 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 IFT52Q9Y366 437 aa12.17□□□□□ -0.46
RAB5A-208ENST00000476544 TMED7Q9Y3B3 224 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms