RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 FCRLAQ7L513 359 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 VRK2Q86Y07 508 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 CDC20BQ86Y33 519 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 STON2Q8WXE9 905 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 TMEM19Q96HH6 336 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 WFIKKN1Q96NZ8 548 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 OR5B2Q96R09 309 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 SLC39A3Q9BRY0 314 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 LIME1Q9H400 295 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 NPHS2Q9NP85 383 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 RLIMQ9NVW2 624 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 ELOVL5Q9NYP7 299 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 DCTN4Q9UJW0 460 aa18.88■□□□□ 0.61
LIME1-204ENST00000476183 UGT2B10P36537 528 aa18.87■□□□□ 0.61
LIME1-204ENST00000476183 APOBEC1P41238 236 aaKnown RBP18.87■□□□□ 0.61
LIME1-204ENST00000476183 KCNJ5P48544 419 aa18.87■□□□□ 0.61
LIME1-204ENST00000476183 IDH2P48735 452 aaKnown RBP18.87■□□□□ 0.61
LIME1-204ENST00000476183 CRISP3P54108 245 aa18.87■□□□□ 0.61
LIME1-204ENST00000476183 EXOC3L2Q2M3D2 409 aa18.87■□□□□ 0.61
LIME1-204ENST00000476183 ZNF836Q6ZNA1 936 aa18.87■□□□□ 0.61
LIME1-204ENST00000476183 GRINAQ7Z429 371 aa18.87■□□□□ 0.61
LIME1-204ENST00000476183 PEX5LQ8IYB4 626 aa18.87■□□□□ 0.61
LIME1-204ENST00000476183 C10orf111Q8N326 155 aa18.87■□□□□ 0.61
LIME1-204ENST00000476183 OR52P1PQ8NH57 321 aa18.87■□□□□ 0.61
LIME1-204ENST00000476183 MAL2Q969L2 176 aa18.87■□□□□ 0.61
LIME1-204ENST00000476183 REXO5Q96IC2 774 aaKnown RBP18.87■□□□□ 0.61
LIME1-204ENST00000476183 ZNF385DQ9H6B1 395 aa18.87■□□□□ 0.61
LIME1-204ENST00000476183 SERINC1Q9NRX5 453 aa18.87■□□□□ 0.61
LIME1-204ENST00000476183 ING1Q9UK53 422 aaPredicted RBP18.87■□□□□ 0.61
LIME1-204ENST00000476183 F8P00451 2351 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 TRBV5-3A0A0A0MS03 114 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 PABPC4LP0CB38 370 aaKnown RBP18.86■□□□□ 0.61
LIME1-204ENST00000476183 BMP2P12643 396 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 DNAJA1P31689 397 aaKnown RBP18.86■□□□□ 0.61
LIME1-204ENST00000476183 RNPS1Q15287 305 aaKnown RBP18.86■□□□□ 0.61
LIME1-204ENST00000476183 SYT14P1Q58G82 188 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 GTF2IRD2BQ6EKJ0 949 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 C22orf34Q6ZV56 151 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 NUFIP2Q7Z417 695 aaKnown RBP18.86■□□□□ 0.61
LIME1-204ENST00000476183 GTF2IRD2Q86UP8 949 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 ADGRG3Q86Y34 549 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 TUSC5Q8IXB3 177 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 C12orf49Q9H741 205 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 TMEM45AQ9NWC5 275 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 KLHL28Q9NXS3 571 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 CALML5Q9NZT1 146 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 VAPAQ9P0L0 249 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 KLHL13Q9P2N7 655 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 CHRNA9Q9UGM1 479 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 NDRG3Q9UGV2 375 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 CHST2Q9Y4C5 530 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 PRR14LQ5THK1 2151 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 HIVEP1P15822 2718 aa18.86■□□□□ 0.61
LIME1-204ENST00000476183 CDHR4A6H8M9 788 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 C16orf97H3BN30 126 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 SMAD9O15198 467 aaKnown RBP18.85■□□□□ 0.61
LIME1-204ENST00000476183 PRKD3O94806 890 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 HRGP04196 525 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 NCF2P19878 526 aaPredicted RBP18.85■□□□□ 0.61
LIME1-204ENST00000476183 DIO1P49895 249 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 IRX1P78414 480 aaPredicted RBP18.85■□□□□ 0.61
LIME1-204ENST00000476183 EPS8Q12929 822 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 FADDQ13158 208 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 GNA13Q14344 377 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 POU4F3Q15319 338 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 TESK1Q15569 626 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 TMPPEQ6ZT21 453 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 ZNF550Q7Z398 422 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 CLIP4Q8N3C7 705 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 SLC25A43Q8WUT9 341 aaPredicted RBP18.85■□□□□ 0.61
LIME1-204ENST00000476183 DNAJA3Q96EY1 480 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 ARL5BQ96KC2 179 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 KLHL4Q9C0H6 718 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 OR11A1Q9GZK7 315 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 IKZF5Q9H5V7 419 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 A4GALTQ9NPC4 353 aa18.85■□□□□ 0.61
LIME1-204ENST00000476183 THUMPD1Q9NXG2 353 aaKnown RBP18.85■□□□□ 0.61
LIME1-204ENST00000476183 ZNF443Q9Y2A4 671 aaPredicted RBP18.85■□□□□ 0.61
LIME1-204ENST00000476183 MAP1AP78559 2803 aaPredicted RBP18.84■□□□□ 0.61
LIME1-204ENST00000476183 UQCRHLA0A096LP55 91 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 A0A0G2JPF8 293 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 A0A1W2PPR1 153 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 CFAP73A6NFT4 308 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 HNRNPCL2B2RXH8 293 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 HNRNPCL3B7ZW38 293 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 FAAHO00519 579 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 SIAH2O43255 324 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 HNRNPCL1O60812 293 aaKnown RBP18.84■□□□□ 0.61
LIME1-204ENST00000476183 GKN3PP0CG01 181 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 HNRNPCL4P0DMR1 293 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 CCNA2P20248 432 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 LIN52Q52LA3 116 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 ANKRD34AQ69YU3 496 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 PSD2Q9BQI7 771 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 RAD21L1Q9H4I0 556 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 BCL2L10Q9HD36 194 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 OSGIN1Q9UJX0 560 aa18.84■□□□□ 0.61
LIME1-204ENST00000476183 TMED7-TICAM2A0A0A6YYA0 188 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 A0A0G2JND7 137 aa18.83■□□□□ 0.6
LIME1-204ENST00000476183 A0A1W2PP18 115 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms