RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 SEC24CP53992 1094 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 MTPNP58546 118 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 GNGT1P63211 74 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 TFF3Q07654 80 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 EPS8Q12929 822 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 CTU2Q2VPK5 515 aaKnown RBP12.97□□□□□ -0.33
ABCF3-211ENST00000475728 INTS11Q5TA45 600 aaKnown RBP12.97□□□□□ -0.33
ABCF3-211ENST00000475728 REP15Q6BDI9 236 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 PPP4R4Q6NUP7 873 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 ZNF836Q6ZNA1 936 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 SERPINA11Q86U17 422 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 MCEMP1Q8IX19 187 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 RELL2Q8NC24 303 aaPredicted RBP12.97□□□□□ -0.33
ABCF3-211ENST00000475728 ATP6V1C2Q8NEY4 427 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 OR8J3Q8NGG0 315 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 FIG4Q92562 907 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 OSTF1Q92882 214 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 MARVELD3Q96A59 401 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 LRRC58Q96CX6 371 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 ZNF845Q96IR2 970 aaPredicted RBP12.97□□□□□ -0.33
ABCF3-211ENST00000475728 CCDC106Q9BWC9 280 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 FAM107BQ9H098 131 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 ENKD1Q9H0I2 346 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 KAT8Q9H7Z6 458 aaKnown RBP12.97□□□□□ -0.33
ABCF3-211ENST00000475728 EVA1AQ9H8M9 152 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 SLC13A4Q9UKG4 626 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 PACSIN3Q9UKS6 424 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 AP3M1Q9Y2T2 418 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 FBN2P35556 2912 aa12.97□□□□□ -0.33
ABCF3-211ENST00000475728 LRBAP50851 2863 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 LOC100653049A0A140TA62 436 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 A0A1W2PNV4 684 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 EEF1E1-BLOC1S5C9J1V9 151 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 SYT5O00445 386 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 EEF1E1O43324 174 aaKnown RBP12.96□□□□□ -0.33
ABCF3-211ENST00000475728 EFNA2O43921 213 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 SNX3O60493 162 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 BCAS1O75363 584 aaPredicted RBP12.96□□□□□ -0.33
ABCF3-211ENST00000475728 KRT34O76011 436 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 PLGP00747 810 aaPredicted RBP12.96□□□□□ -0.33
ABCF3-211ENST00000475728 OPN1LWP04000 364 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 IL11P20809 199 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 POLR2HP52434 150 aaKnown RBP12.96□□□□□ -0.33
ABCF3-211ENST00000475728 CSNK2A1P68400 391 aaPredicted RBP12.96□□□□□ -0.33
ABCF3-211ENST00000475728 ZNF787Q6DD87 383 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 POMZP3Q6PJE2 187 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 DHRS4L2Q6PKH6 230 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 MEX3BQ6ZN04 569 aaKnown RBP12.96□□□□□ -0.33
ABCF3-211ENST00000475728 NET1Q7Z628 596 aaPredicted RBP12.96□□□□□ -0.33
ABCF3-211ENST00000475728 KIF18BQ86Y91 864 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 GCNT2Q8N0V5 402 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 RNASE6Q93091 150 aaKnown RBP12.96□□□□□ -0.33
ABCF3-211ENST00000475728 ECSITQ9BQ95 431 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 RLIMQ9NVW2 624 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 KLHL28Q9NXS3 571 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 CHRNA9Q9UGM1 479 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 EMC9Q9Y3B6 208 aa12.96□□□□□ -0.33
ABCF3-211ENST00000475728 C19orf84I3L1E1 186 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 AP3D1O14617 1153 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 MSTNO14793 375 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 TFPIP10646 304 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 DRD4P21917 467 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 CTBP2P56545 445 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 RAC3P60763 192 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 PLAURQ03405 335 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 FOXF2Q12947 444 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 CAPRIN1Q14444 709 aaKnown RBP12.95□□□□□ -0.34
ABCF3-211ENST00000475728 RNPS1Q15287 305 aaKnown RBP12.95□□□□□ -0.34
ABCF3-211ENST00000475728 ADRM1Q16186 407 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 ZNF239Q16600 458 aaKnown RBP12.95□□□□□ -0.34
ABCF3-211ENST00000475728 SYT14P1Q58G82 188 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 WBP2NLQ6ICG8 309 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 NANOGP8Q6NSW7 305 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 ARPINQ7Z6K5 226 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 PATL1Q86TB9 770 aaKnown RBP12.95□□□□□ -0.34
ABCF3-211ENST00000475728 MTDHQ86UE4 582 aaKnown RBP12.95□□□□□ -0.34
ABCF3-211ENST00000475728 ARMC8Q8IUR7 673 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 SLC43A2Q8N370 569 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 CLIP4Q8N3C7 705 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 CNEP1R1Q8N9A8 125 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 ACBD4Q8NC06 268 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 DDIT4LQ96D03 193 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 CMTM5Q96DZ9 223 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 ZHX1-C8orf76Q96EF9 292 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 GMPPAQ96IJ6 420 aaPredicted RBP12.95□□□□□ -0.34
ABCF3-211ENST00000475728 OR5B2Q96R09 309 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 TACO1Q9BSH4 297 aaKnown RBP12.95□□□□□ -0.34
ABCF3-211ENST00000475728 NANOGQ9H9S0 305 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 GP6Q9HCN6 339 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 NPDC1Q9NQX5 325 aaPredicted RBP12.95□□□□□ -0.34
ABCF3-211ENST00000475728 CTPS2Q9NRF8 586 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 ARMCX1Q9P291 453 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 HDGFL3Q9Y3E1 203 aa12.95□□□□□ -0.34
ABCF3-211ENST00000475728 CACNA1CQ13936 2221 aa12.94□□□□□ -0.34
ABCF3-211ENST00000475728 ARHGAP21Q5T5U3 1957 aa12.94□□□□□ -0.34
ABCF3-211ENST00000475728 TMED7-TICAM2A0A0A6YYA0 188 aa12.94□□□□□ -0.34
ABCF3-211ENST00000475728 ZNF208O43345 1280 aa12.94□□□□□ -0.34
ABCF3-211ENST00000475728 DNPH1O43598 174 aa12.94□□□□□ -0.34
ABCF3-211ENST00000475728 AQP8O94778 261 aa12.94□□□□□ -0.34
ABCF3-211ENST00000475728 COX4I1P13073 169 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms