RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 A0A1W2PRS3 328 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 KIR3DP1A8MWS1 328 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 OR10H3O60404 316 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 FOXK1P85037 733 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 PRICKLE2Q7Z3G6 844 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 AQP11Q8NBQ7 271 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 CLEC1AQ8NC01 280 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 ING2Q9H160 280 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 HPF1Q9NWY4 346 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 ICAM5Q9UMF0 924 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 A0A1W2PRQ8 180 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 SHISA8B8ZZ34 492 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 CCNB2O95067 398 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 HOXB6P17509 224 aaKnown RBP16.48■□□□□ 0.23
ATG4B-217ENST00000475693 FUT1P19526 365 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 ADH7P40394 386 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 CCL11P51671 97 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 ARHGDIAP52565 204 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 GABARAPL2P60520 117 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 DGCR6Q14129 220 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 COL28A1Q2UY09 1125 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 DEFB109BQ30KR1 87 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 ANKDD1AQ495B1 522 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 TTC23Q5W5X9 447 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 ZNF770Q6IQ21 691 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-217ENST00000475693 THAP5Q7Z6K1 395 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 PFN4Q8NHR9 129 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 KCNE4Q8WWG9 221 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 HDAC2Q92769 488 aaKnown RBP16.48■□□□□ 0.23
ATG4B-217ENST00000475693 PROK2Q9HC23 129 aa16.48■□□□□ 0.23
ATG4B-217ENST00000475693 ANKRD11Q6UB99 2663 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-217ENST00000475693 DPM1O60762 260 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 NAGAP17050 411 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 BMXP51813 675 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 GPR85P60893 370 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 OC90Q02509 493 aaPredicted RBP16.47■□□□□ 0.23
ATG4B-217ENST00000475693 AIMP2Q13155 320 aaKnown RBP16.47■□□□□ 0.23
ATG4B-217ENST00000475693 OPN5Q6U736 354 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 ARSKQ6UWY0 536 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 ZER1Q7Z7L7 766 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 CMIPQ8IY22 773 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 GALNT16Q8N428 558 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 OR4K5Q8NGD3 323 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 HES7Q9BYE0 225 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 TOR3AQ9H497 397 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 TMEM27Q9HBJ8 222 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 CNIH4Q9P003 139 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 TESQ9UGI8 421 aaKnown RBP16.47■□□□□ 0.23
ATG4B-217ENST00000475693 FBXL2Q9UKC9 423 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 A0A0B4J2E0 115 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 A0A1B0GX12 115 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 A0A1W2PQD3 144 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 TRAPPC13A5PLN9 417 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 BCL10O95999 233 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 NGFRP08138 427 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 OCM2P0CE71 109 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 OCMP0CE72 109 aaPredicted RBP16.47■□□□□ 0.23
ATG4B-217ENST00000475693 THRBP10828 461 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 GSSP48637 474 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 TMED10P49755 219 aaKnown RBP16.47■□□□□ 0.23
ATG4B-217ENST00000475693 ST3GAL3Q11203 375 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 CBX3Q13185 183 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 NEDD8Q15843 81 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 ALG10BQ5I7T1 473 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 GTF2IRD2BQ6EKJ0 949 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 XAF1Q6GPH4 301 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 C16orf87Q6PH81 154 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 ZNF550Q7Z398 422 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 GTF2IRD2Q86UP8 949 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 FER1L6-AS2Q96M78 137 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 MUS81Q96NY9 551 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 SIGLEC12Q96PQ1 595 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 ZNF559Q9BR84 538 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 LAT2Q9GZY6 243 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 LHPPQ9H008 270 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 C20orf141Q9NUB4 165 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 KIF17Q9P2E2 1029 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 PAIP2BQ9ULR5 123 aaKnown RBP16.47■□□□□ 0.23
ATG4B-217ENST00000475693 TMCC3Q9ULS5 477 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 VDAC3Q9Y277 283 aa16.47■□□□□ 0.23
ATG4B-217ENST00000475693 FUOMA2VDF0 154 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 ATP6V1G1O75348 118 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 SULT1C4O75897 302 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 CLPXO76031 633 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 OR5F1O95221 314 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 CRHBPP24387 322 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 CD96P40200 585 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 EIF2S3P41091 472 aaKnown RBP16.46■□□□□ 0.23
ATG4B-217ENST00000475693 UGT2B15P54855 530 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 TRAM2Q15035 370 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 MEP1AQ16819 746 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 KDM4DQ6B0I6 523 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 ZNF730Q6ZMV8 503 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 NRMQ8IXM6 262 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 CYP4Z2PQ8N1L4 340 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 ARMC10Q8N2F6 343 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 SLC15A4Q8N697 577 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 OR5M1Q8NGP8 315 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 ZNF563Q8TA94 476 aa16.46■□□□□ 0.23
ATG4B-217ENST00000475693 TTC9Q92623 222 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms