RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 MFSD13AQ14CX5 517 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 OR1Q1Q15612 314 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 MAPK14Q16539 360 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 LRRC36Q1X8D7 754 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 ZNF791Q3KP31 576 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-207ENST00000475558 NHSL2Q5HYW2 709 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 ACER2Q5QJU3 275 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 DCAF10Q5QP82 559 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 OTUD3Q5T2D3 398 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-207ENST00000475558 FAM69BQ5VUD6 431 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 C1orf94Q6P1W5 598 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 FAHD1Q6P587 224 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 TTC33Q6PID6 262 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-207ENST00000475558 ZNF730Q6ZMV8 503 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 RTL4Q6ZR62 310 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 MBOAT2Q6ZWT7 520 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 WDR53Q7Z5U6 358 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-207ENST00000475558 MRGPREQ86SM8 312 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 ZNF614Q8N883 585 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 ZNF321PQ8N8H1 164 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 POGLUT1Q8NBL1 392 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 FAM71CQ8NEG0 241 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 OR10G2Q8NGC3 310 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 OR4C15Q8NGM1 316 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 OR10Q1Q8NGQ4 319 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 OR6S1Q8NH40 331 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 B4GALNT2Q8NHY0 566 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 ZNF563Q8TA94 476 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 VANGL1Q8TAA9 524 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-207ENST00000475558 PIGXQ8TBF5 258 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 ADAMTS17Q8TE56 1095 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 ADAMTS16Q8TE57 1224 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 DOK4Q8TEW6 326 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 DUSP19Q8WTR2 217 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 RNF138Q8WVD3 245 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 ST8SIA1Q92185 356 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 TFAP2CQ92754 450 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 EFHD2Q96C19 240 aaPredicted RBP6.41□□□□□ -1.38
SHQ1-207ENST00000475558 C8orf44Q96CB5 159 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 RASL10BQ96S79 203 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 SLC29A1Q99808 456 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 APOL4Q9BPW4 351 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 TACO1Q9BSH4 297 aaKnown RBP6.41□□□□□ -1.38
SHQ1-207ENST00000475558 RNF32Q9H0A6 362 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 ING2Q9H160 280 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 CDCP1Q9H5V8 836 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 ZNF160Q9HCG1 818 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 TIMMDC1Q9NPL8 285 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 PAPOLBQ9NRJ5 636 aaKnown RBP6.41□□□□□ -1.38
SHQ1-207ENST00000475558 SERINC1Q9NRX5 453 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 SACM1LQ9NTJ5 587 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 FBXO34Q9NWN3 711 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 HPF1Q9NWY4 346 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 MED31Q9Y3C7 131 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 TESMINQ9Y4I5 508 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 U3KQV3 271 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 C2CD3Q4AC94 2353 aa6.41□□□□□ -1.38
SHQ1-207ENST00000475558 SPENQ96T58 3664 aaKnown RBP6.4□□□□□ -1.38
SHQ1-207ENST00000475558 DIDO1Q9BTC0 2240 aaKnown RBP6.4□□□□□ -1.38
SHQ1-207ENST00000475558 A0A087WUJ7 227 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 A0A0B4J2E0 115 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 LOC100130705A0A1B0GUX0 176 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 A0A1B0GX12 115 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 ANKUB1A6NFN9 424 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 TMEM200CA6NKL6 621 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 SNTNA6NMZ2 147 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 EI24O14681 340 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 HCRTR2O43614 444 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 OR2T1O43869 369 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 BCAS1O75363 584 aaPredicted RBP6.4□□□□□ -1.38
SHQ1-207ENST00000475558 NME6O75414 186 aaPredicted RBP6.4□□□□□ -1.38
SHQ1-207ENST00000475558 ITGA10O75578 1167 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 CBR3O75828 277 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 OR2J2O76002 312 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 RCBTB2O95199 551 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 NADKO95544 446 aaPredicted RBP6.4□□□□□ -1.38
SHQ1-207ENST00000475558 IGHA1P01876 353 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 P04436 131 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 HMGN1P05114 100 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 UBTFL6P0CB48 400 aaPredicted RBP6.4□□□□□ -1.38
SHQ1-207ENST00000475558 ITGAMP11215 1152 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 OSMP13725 252 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 BMP7P18075 431 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 IGFBP5P24593 272 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 CXCR1P25024 350 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 RYKP34925 604 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 CAPGP40121 348 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 CASP3P42574 277 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 SLC9A3P48764 834 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 HLCSP50747 726 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 ZNF136P52737 540 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 EFNA3P52797 238 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 UGT2B15P54855 530 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 CTBP2P56545 445 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 CXCR4P61073 352 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 PRKCDQ05655 676 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 NPRL3Q12980 569 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 TSPAN31Q12999 210 aa6.4□□□□□ -1.38
SHQ1-207ENST00000475558 MRPL49Q13405 166 aaKnown RBP6.4□□□□□ -1.38
SHQ1-207ENST00000475558 KEAP1Q14145 624 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms