RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 TANGO2Q6ICL3 276 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 SBSNQ6UWP8 590 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 ELOVL3Q9HB03 270 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 SPAG17Q6Q759 2223 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 RGPD1P0DJD0 1748 aa10.26□□□□□ -0.77
VAPB-204ENST00000475243 TMEM11P17152 192 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 MSR1P21757 451 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 HOXD9P28356 352 aaPredicted RBP10.25□□□□□ -0.77
VAPB-204ENST00000475243 CD79BP40259 229 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 TGFBR3Q03167 851 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 DYRK1AQ13627 763 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 HNF4GQ14541 408 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 ZNF674Q2M3X9 581 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 FNDC8Q8TC99 324 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 DUSP19Q8WTR2 217 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 BORCS7Q96B45 105 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 OR52D1Q9H346 318 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 DYNLRB1Q9NP97 96 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 SLAMF7Q9NQ25 335 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 H3BMQ9 156 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 SFRP5Q5T4F7 317 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 NDUFAF7Q7L592 441 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 GDPD1Q8N9F7 314 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 GOLM1Q8NBJ4 401 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 ABHD11Q8NFV4 315 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 ZNF417Q8TAU3 575 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 NTMT1Q9BV86 223 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 TSPAN10Q9H1Z9 355 aaPredicted RBP10.25□□□□□ -0.77
VAPB-204ENST00000475243 UBQLN4Q9NRR5 601 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 CUTCQ9NTM9 273 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 SLC6A5Q9Y345 797 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 V9GY05 133 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 ENSAO43768 121 aaKnown RBP10.25□□□□□ -0.77
VAPB-204ENST00000475243 AKAIN1P0CW23 69 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 INTS6Q9UL03 887 aaKnown RBP10.25□□□□□ -0.77
VAPB-204ENST00000475243 CD300LBA8K4G0 201 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 B4DXG7 233 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 OR2T1O43869 369 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 CPOXP36551 454 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 DLSTP36957 453 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 EFNA3P52797 238 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 KEAP1Q14145 624 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 TMEM176BQ3YBM2 270 aaPredicted RBP10.25□□□□□ -0.77
VAPB-204ENST00000475243 B3GLCTQ6Y288 498 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 GRAMD2AQ8IUY3 354 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 OR5L1Q8NGL2 311 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 OR13C2Q8NGS9 318 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 HYLS1Q96M11 299 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 C1QTNF2Q9BXJ5 285 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 ULBP2Q9BZM5 246 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 NUMBLQ9Y6R0 609 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 LOC105369274A0A096LPK9 316 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 TMEM269A0A1B0GVZ9 245 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 C2orf72A6NCS6 295 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 H7C1C5 153 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 SCRG1O75711 98 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 GIFP27352 417 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 TAS2R20P59543 309 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 LCN6P62502 163 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 CAMK2DQ13557 499 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 SLC5A12Q1EHB4 618 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 METTL11BQ5VVY1 283 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 WBP2NLQ6ICG8 309 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 OR4N4Q8N0Y3 316 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 ANKRD10Q9NXR5 420 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 SUSD5O60279 629 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 BCAS1O75363 584 aaPredicted RBP10.25□□□□□ -0.77
VAPB-204ENST00000475243 C21orf33P30042 268 aaPredicted RBP10.25□□□□□ -0.77
VAPB-204ENST00000475243 IDUAP35475 653 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 SLC35D2Q76EJ3 337 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 SULF2Q8IWU5 870 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 OR1J4Q8NGS1 313 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 PAQR8Q8TEZ7 354 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 FAM234AQ9H0X4 552 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 OLAHQ9NV23 265 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 C4BP0C0L5 1744 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 KIF13AQ9H1H9 1805 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 CPMP14384 443 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 PRLHRP49683 370 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 RRAS2P62070 204 aaPredicted RBP10.25□□□□□ -0.77
VAPB-204ENST00000475243 CXADRP78310 365 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 SF3A2Q15428 464 aaKnown RBP10.25□□□□□ -0.77
VAPB-204ENST00000475243 LTB4RQ15722 352 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 SSX2Q16385 188 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 LINC00696Q6ZRV3 163 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 OR8J2Q8NGG1 315 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 RPS10P5Q9NQ39 176 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 RPH3ALQ9UNE2 315 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 SIT1Q9Y3P8 196 aa10.25□□□□□ -0.77
VAPB-204ENST00000475243 ANKRD33BA6NCL7 494 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 BCAT2O15382 392 aaPredicted RBP10.24□□□□□ -0.77
VAPB-204ENST00000475243 UPK1BO75841 260 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 EN2P19622 333 aaPredicted RBP10.24□□□□□ -0.77
VAPB-204ENST00000475243 RPE65Q16518 533 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 TMEM64Q6YI46 380 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 OR14K1Q8NGZ2 314 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 OR5K2Q8NHB8 316 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 PPP1R35Q8TAP8 253 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 ZFAND2BQ8WV99 257 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 ASB11Q8WXH4 323 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms