RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SAGE2PA6NJ88 616 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 ELOA3DA6NLF2 546 aaPredicted RBP19.96■□□□□ 0.79
CCM2-206ENST00000474617 ALG1L2C9J202 215 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 ZNF670-ZNF695F2Z2N8 137 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 SLC30A4O14863 429 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 SYPP08247 313 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 LIMS3P0CW19 117 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 LIMS4P0CW20 117 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 CD53P19397 219 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 GABRA5P31644 462 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 ACTC1P68032 377 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 ACTA1P68133 377 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 CCL7P80098 99 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 DCDP81605 110 aaKnown RBP19.96■□□□□ 0.79
CCM2-206ENST00000474617 ELOA3BQ3SY89 546 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 NKAIN1Q4KMZ8 207 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 VWA2Q5GFL6 755 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 ACBD7Q8N6N7 88 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 GALNT6Q8NCL4 622 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 ELOA3Q8NG57 546 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 PHOSPHO1Q8TCT1 267 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 GPX7Q96SL4 187 aaPredicted RBP19.96■□□□□ 0.79
CCM2-206ENST00000474617 CENPOQ9BU64 300 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 PMF1-BGLAPU3KQ54 211 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 UNC13CQ8NB66 2214 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 CABIN1Q9Y6J0 2220 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 IGHV5-10-1A0A0J9YXX1 117 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 J3QRE1 110 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 ARPC3O15145 178 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 TSPAN2O60636 221 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 ADAM11O75078 769 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 OR7A10O76100 309 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 APEHP13798 732 aaKnown RBP19.95■□□□□ 0.78
CCM2-206ENST00000474617 NOS3P29474 1203 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 NRG3P56975 720 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 COL9A2Q14055 689 aaPredicted RBP19.95■□□□□ 0.78
CCM2-206ENST00000474617 EFR3AQ14156 821 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 IL11RAQ14626 422 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 PERM1Q5SV97 790 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 C1orf189Q5VU69 101 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 COX15Q7KZN9 410 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 C9orf40Q8IXQ3 194 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 MINDY2Q8NBR6 621 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 STT3BQ8TCJ2 826 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 SEMA4CQ9C0C4 833 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 MCCC2Q9HCC0 563 aa19.95■□□□□ 0.78
CCM2-206ENST00000474617 A0A1W2PQM1 296 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 A8MUA0 341 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 REM1O75628 298 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 SCRG1O75711 98 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 CFIP05156 583 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 CRYBB2P43320 205 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 ZNF45Q02386 682 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 LGALS3BPQ08380 585 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 PLCXD2Q0VAA5 305 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 LCN1P1Q5VSP4 162 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 PLBD1Q6P4A8 553 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 ATG4DQ86TL0 474 aaPredicted RBP19.94■□□□□ 0.78
CCM2-206ENST00000474617 GPALPP1Q8IXQ4 340 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 ZNF485Q8NCK3 441 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 OR8K3Q8NH51 312 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 METTL21AQ8WXB1 218 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 CLIP3Q96DZ5 547 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 OR6C1Q96RD1 312 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 GAL3ST4Q96RP7 486 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 MED18Q9BUE0 208 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 SLC26A1Q9H2B4 701 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 RYDENQ9NUL5 291 aaKnown RBP19.94■□□□□ 0.78
CCM2-206ENST00000474617 ERVK13-1Q9NX77 482 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 GSTK1Q9Y2Q3 226 aa19.94■□□□□ 0.78
CCM2-206ENST00000474617 SPIN1Q9Y657 262 aaPredicted RBP19.94■□□□□ 0.78
CCM2-206ENST00000474617 OR6C70A6NIJ9 312 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 CDC40O60508 579 aaKnown RBP eCLIP19.93■□□□□ 0.78
CCM2-206ENST00000474617 FOXD2O60548 495 aaPredicted RBP19.93■□□□□ 0.78
CCM2-206ENST00000474617 RFPL3O75679 317 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 GPX5O75715 221 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 IL1AP01583 271 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 FGF9P31371 208 aaPredicted RBP19.93■□□□□ 0.78
CCM2-206ENST00000474617 SOX3P41225 446 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 GRK6P43250 576 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 ITGADQ13349 1161 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 SLC23A3Q6PIS1 610 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 THSD4Q6ZMP0 1018 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 OVCH1Q7RTY7 1134 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 PPP1R3BQ86XI6 285 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 OR51A7Q8NH64 312 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 NUBPLQ8TB37 319 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 MRPL48Q96GC5 212 aaKnown RBP19.93■□□□□ 0.78
CCM2-206ENST00000474617 TNFRSF13CQ96RJ3 184 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 ADOQ96SZ5 270 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 SECISBP2Q96T21 854 aaKnown RBP19.93■□□□□ 0.78
CCM2-206ENST00000474617 TBCCD1Q9NVR7 557 aa19.93■□□□□ 0.78
CCM2-206ENST00000474617 C19orf25Q9UFG5 118 aaPredicted RBP19.93■□□□□ 0.78
CCM2-206ENST00000474617 NXT1Q9UKK6 140 aaKnown RBP19.93■□□□□ 0.78
CCM2-206ENST00000474617 IMPA2O14732 288 aa19.92■□□□□ 0.78
CCM2-206ENST00000474617 HEXBP07686 556 aa19.92■□□□□ 0.78
CCM2-206ENST00000474617 NAGAP17050 411 aa19.92■□□□□ 0.78
CCM2-206ENST00000474617 FUT1P19526 365 aa19.92■□□□□ 0.78
CCM2-206ENST00000474617 PGCP20142 388 aa19.92■□□□□ 0.78
CCM2-206ENST00000474617 TAS2R43P59537 309 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms