RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 NFKBIDQ8NI38 313 aa16.04■□□□□ 0.16
EFNA1-204ENST00000474413 LINC01560Q8TB33 94 aa16.04■□□□□ 0.16
EFNA1-204ENST00000474413 ARL5BQ96KC2 179 aa16.04■□□□□ 0.16
EFNA1-204ENST00000474413 ZNF559Q9BR84 538 aa16.04■□□□□ 0.16
EFNA1-204ENST00000474413 OR11A1Q9GZK7 315 aa16.04■□□□□ 0.16
EFNA1-204ENST00000474413 PAQR5Q9NXK6 330 aaPredicted RBP16.04■□□□□ 0.16
EFNA1-204ENST00000474413 STOML1Q9UBI4 398 aa16.04■□□□□ 0.16
EFNA1-204ENST00000474413 MCTS1Q9ULC4 181 aaKnown RBP16.04■□□□□ 0.16
EFNA1-204ENST00000474413 SPG11Q96JI7 2443 aa16.04■□□□□ 0.16
EFNA1-204ENST00000474413 FXYD1O00168 92 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 CTAG2O75638 210 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 PGM3O95394 542 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 THBS1P07996 1170 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 GKN3PP0CG01 181 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 IL7RP16871 459 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 EDNRAP25101 427 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 IDH2P48735 452 aaKnown RBP16.03■□□□□ 0.16
EFNA1-204ENST00000474413 LIN52Q52LA3 116 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 SYT14P1Q58G82 188 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 RUNDC3AQ59EK9 446 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 GCNT6Q5T4J0 391 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 PRAMEF8Q5VWM4 474 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 PRAMEF7Q5VXH5 474 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 METTL21CQ5VZV1 264 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 C22orf34Q6ZV56 151 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 GRINAQ7Z429 371 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 DHDDSQ86SQ9 333 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 PTOV1Q86YD1 416 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 PEX5LQ8IYB4 626 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 OR6K3Q8NGY3 331 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 C10orf82Q8WW14 230 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 TMEM234Q8WY98 164 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 NRGNQ92686 78 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 CPNE4Q96A23 557 aaPredicted RBP16.03■□□□□ 0.16
EFNA1-204ENST00000474413 DNAJA3Q96EY1 480 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 OR5B2Q96R09 309 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 GPATCH1Q9BRR8 931 aaKnown RBP16.03■□□□□ 0.16
EFNA1-204ENST00000474413 CHRNA9Q9UGM1 479 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 LEF1Q9UJU2 399 aaPredicted RBP16.03■□□□□ 0.16
EFNA1-204ENST00000474413 OSGIN1Q9UJX0 560 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 TRIM33Q9UPN9 1127 aa16.03■□□□□ 0.16
EFNA1-204ENST00000474413 CREBBPQ92793 2442 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 A0A0G2JPF8 293 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 ZC3H12DA2A288 527 aaKnown RBP16.02■□□□□ 0.16
EFNA1-204ENST00000474413 GJE1A6NN92 205 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 HNRNPCL2B2RXH8 293 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 ZNF814B7Z6K7 855 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 HNRNPCL3B7ZW38 293 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 SIAH2O43255 324 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 FRS3O43559 492 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 HNRNPCL1O60812 293 aaKnown RBP16.02■□□□□ 0.16
EFNA1-204ENST00000474413 SYNGR4O95473 234 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 PABPC4LP0CB38 370 aaKnown RBP16.02■□□□□ 0.16
EFNA1-204ENST00000474413 HNRNPCL4P0DMR1 293 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 CPA2P48052 419 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 MTPNP58546 118 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 EEF1A1P5Q5VTE0 462 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 ABLIM2Q6H8Q1 611 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 NUFIP2Q7Z417 695 aaKnown RBP16.02■□□□□ 0.16
EFNA1-204ENST00000474413 SERPINA11Q86U17 422 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 BBS10Q8TAM1 723 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 FAM222BQ8WU58 562 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 SPATA9Q9BWV2 254 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 RABEP2Q9H5N1 569 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 SAR1AQ9NR31 198 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 THUMPD1Q9NXG2 353 aaKnown RBP16.02■□□□□ 0.16
EFNA1-204ENST00000474413 CALML5Q9NZT1 146 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.02■□□□□ 0.16
EFNA1-204ENST00000474413 TESMINQ9Y4I5 508 aa16.02■□□□□ 0.16
EFNA1-204ENST00000474413 A0A1W2PPR1 153 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 TMEM72A0PK05 275 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 CFAP73A6NFT4 308 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 A6NNC1 897 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 RAMP1O60894 148 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 GCM2O75603 506 aaPredicted RBP16.01■□□□□ 0.15
EFNA1-204ENST00000474413 FESP07332 822 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 VIMP08670 466 aaKnown RBP16.01■□□□□ 0.15
EFNA1-204ENST00000474413 TROVE2P10155 538 aaKnown RBP eCLIP16.01■□□□□ 0.15
EFNA1-204ENST00000474413 TACR3P29371 465 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 SLC7A1P30825 629 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 CD79BP40259 229 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 MDH1P40925 334 aaKnown RBP16.01■□□□□ 0.15
EFNA1-204ENST00000474413 APOBEC1P41238 236 aaKnown RBP16.01■□□□□ 0.15
EFNA1-204ENST00000474413 PCYT1AP49585 367 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 DIO1P49895 249 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 RAC3P60763 192 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 CAPRIN1Q14444 709 aaKnown RBP16.01■□□□□ 0.15
EFNA1-204ENST00000474413 GLIPR1L2Q4G1C9 344 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 FCRLAQ7L513 359 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 ZNF563Q8TA94 476 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 TSPEARQ8WU66 669 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 ANKRD27Q96NW4 1050 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 CGREF1Q99674 301 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 PSD2Q9BQI7 771 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 SLC39A3Q9BRY0 314 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 PRRG4Q9BZD6 226 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 ADAM19Q9H013 955 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 RAD21L1Q9H4I0 556 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 TMEM38AQ9H6F2 299 aa16.01■□□□□ 0.15
EFNA1-204ENST00000474413 PLSCR4Q9NRQ2 329 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms