RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 GTF2IRD2Q86UP8 949 aa15.99■□□□□ 0.15
UPF3A-203ENST00000474056 FUNDC1Q8IVP5 155 aa15.99■□□□□ 0.15
UPF3A-203ENST00000474056 TUSC5Q8IXB3 177 aa15.99■□□□□ 0.15
UPF3A-203ENST00000474056 OR5B2Q96R09 309 aa15.99■□□□□ 0.15
UPF3A-203ENST00000474056 MED18Q9BUE0 208 aa15.99■□□□□ 0.15
UPF3A-203ENST00000474056 CCDC106Q9BWC9 280 aa15.99■□□□□ 0.15
UPF3A-203ENST00000474056 PAIP1Q9H074 479 aaKnown RBP15.99■□□□□ 0.15
UPF3A-203ENST00000474056 PLEKHF2Q9H8W4 249 aa15.99■□□□□ 0.15
UPF3A-203ENST00000474056 C6orf203Q9P0P8 240 aaPredicted RBP15.99■□□□□ 0.15
UPF3A-203ENST00000474056 P2RX2Q9UBL9 471 aa15.99■□□□□ 0.15
UPF3A-203ENST00000474056 PCDHB14Q9Y5E9 798 aa15.99■□□□□ 0.15
UPF3A-203ENST00000474056 RAI1Q7Z5J4 1906 aaPredicted RBP15.98■□□□□ 0.15
UPF3A-203ENST00000474056 ZNF469Q96JG9 3925 aaPredicted RBP15.98■□□□□ 0.15
UPF3A-203ENST00000474056 AP3D1O14617 1153 aa15.98■□□□□ 0.15
UPF3A-203ENST00000474056 DSCAMO60469 2012 aa15.98■□□□□ 0.15
UPF3A-203ENST00000474056 IL7RP16871 459 aa15.98■□□□□ 0.15
UPF3A-203ENST00000474056 HOXB9P17482 250 aaPredicted RBP15.98■□□□□ 0.15
UPF3A-203ENST00000474056 MAGEA8P43361 318 aa15.98■□□□□ 0.15
UPF3A-203ENST00000474056 RNPS1Q15287 305 aaKnown RBP15.98■□□□□ 0.15
UPF3A-203ENST00000474056 SYT14P1Q58G82 188 aa15.98■□□□□ 0.15
UPF3A-203ENST00000474056 MRPL2Q5T653 305 aaKnown RBP15.98■□□□□ 0.15
UPF3A-203ENST00000474056 PAMR1Q6UXH9 720 aa15.98■□□□□ 0.15
UPF3A-203ENST00000474056 NUFIP2Q7Z417 695 aaKnown RBP15.98■□□□□ 0.15
UPF3A-203ENST00000474056 GRINAQ7Z429 371 aa15.98■□□□□ 0.15
UPF3A-203ENST00000474056 CMIPQ8IY22 773 aa15.98■□□□□ 0.15
UPF3A-203ENST00000474056 CKAP2Q8WWK9 683 aa15.98■□□□□ 0.15
UPF3A-203ENST00000474056 ZC3HAV1LQ96H79 300 aaKnown RBP15.98■□□□□ 0.15
UPF3A-203ENST00000474056 PSD2Q9BQI7 771 aa15.98■□□□□ 0.15
UPF3A-203ENST00000474056 MTHFD2LQ9H903 347 aaPredicted RBP15.98■□□□□ 0.15
UPF3A-203ENST00000474056 SERINC1Q9NRX5 453 aa15.98■□□□□ 0.15
UPF3A-203ENST00000474056 KLHL13Q9P2N7 655 aa15.98■□□□□ 0.15
UPF3A-203ENST00000474056 ROS1P08922 2347 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 HIVEP1P15822 2718 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 DSPPQ9NZW4 1301 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 NR5A2O00482 541 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 SMAD9O15198 467 aaKnown RBP15.97■□□□□ 0.15
UPF3A-203ENST00000474056 PRKD3O94806 890 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 DBIP07108 87 aaKnown RBP15.97■□□□□ 0.15
UPF3A-203ENST00000474056 CRYGSP22914 178 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 APOBEC1P41238 236 aaKnown RBP15.97■□□□□ 0.15
UPF3A-203ENST00000474056 IDH2P48735 452 aaKnown RBP15.97■□□□□ 0.15
UPF3A-203ENST00000474056 RPS26P11Q5JNZ5 115 aaPredicted RBP15.97■□□□□ 0.15
UPF3A-203ENST00000474056 TMEM201Q5SNT2 666 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 SPNS3Q6ZMD2 512 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 STAC2Q6ZMT1 411 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 BEND4Q6ZU67 534 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 VRK2Q86Y07 508 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 PEX5LQ8IYB4 626 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 SLC25A43Q8WUT9 341 aaPredicted RBP15.97■□□□□ 0.15
UPF3A-203ENST00000474056 DNAJA3Q96EY1 480 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 THOC1Q96FV9 657 aaKnown RBP15.97■□□□□ 0.15
UPF3A-203ENST00000474056 TMEM19Q96HH6 336 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 MAGEB18Q96M61 343 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 CCDC167Q9P0B6 97 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 CHRNA9Q9UGM1 479 aa15.97■□□□□ 0.15
UPF3A-203ENST00000474056 ING1Q9UK53 422 aaPredicted RBP15.97■□□□□ 0.15
UPF3A-203ENST00000474056 DEFB108AA8MXU0 73 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 NUDT7P0C024 238 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 TFPTP0C1Z6 253 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 CD1EP15812 388 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 DNASE1P24855 282 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 DIO1P49895 249 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 CRISP3P54108 245 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 EPS8Q12929 822 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 RGNQ15493 299 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 BLOC1S3Q6QNY0 202 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 TFAP2EQ6VUC0 442 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 ZNF836Q6ZNA1 936 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 TMPPEQ6ZT21 453 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 STK32CQ86UX6 486 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 ADGRG3Q86Y34 549 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 SLC43A2Q8N370 569 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 OR52P1PQ8NH57 321 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 SLC38A5Q8WUX1 472 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 PMM1Q92871 262 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 SPDL1Q96EA4 605 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 ARL5BQ96KC2 179 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 OR11A1Q9GZK7 315 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 SLC52A3Q9NQ40 469 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 RLIMQ9NVW2 624 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 ZNF226Q9NYT6 803 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 CALML5Q9NZT1 146 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 SLAMF8Q9P0V8 285 aa15.96■□□□□ 0.15
UPF3A-203ENST00000474056 SPIN1Q9Y657 262 aaPredicted RBP15.96■□□□□ 0.15
UPF3A-203ENST00000474056 A0A096LPI6 279 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 SULT2B1O00204 365 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 CLIC1O00299 241 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 CYTIPO60759 359 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 FESP07332 822 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 YES1P07947 543 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 GKN3PP0CG01 181 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 TFPIP10646 304 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 CCNA2P20248 432 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 GNA13Q14344 377 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 LIN52Q52LA3 116 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 PAGE3Q5JUK9 113 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 LRIF1Q5T3J3 769 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 MSRB3Q8IXL7 192 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 PIK3IP1Q96FE7 263 aa15.95■□□□□ 0.14
UPF3A-203ENST00000474056 ZNF300Q96RE9 604 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms