RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PNPT1Q8TCS8 783 aaKnown RBP7.14□□□□□ -1.27
USP48-207ENST00000471752 PIGTQ969N2 578 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 ROPN1LQ96C74 230 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 SLC35G5Q96KT7 338 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 ZIM3Q96PE6 472 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 CCDC106Q9BWC9 280 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 NMUR2Q9GZQ4 415 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 ZNF350Q9GZX5 532 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 HOXD1Q9GZZ0 328 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 CENPHQ9H3R5 247 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 KCNK9Q9NPC2 374 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 ZNF701Q9NV72 531 aaPredicted RBP7.14□□□□□ -1.27
USP48-207ENST00000471752 RLIMQ9NVW2 624 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 ASIC5Q9NY37 505 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 MID2Q9UJV3 735 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 GPR52Q9Y2T5 361 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 CHST2Q9Y4C5 530 aa7.14□□□□□ -1.27
USP48-207ENST00000471752 MAGED1Q9Y5V3 778 aaPredicted RBP7.14□□□□□ -1.27
USP48-207ENST00000471752 GPC6Q9Y625 555 aaPredicted RBP7.14□□□□□ -1.27
USP48-207ENST00000471752 PRSS51A0A1B0GVH4 220 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 TMEM72A0PK05 275 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 SHISA9B4DS77 424 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 RNF223E7ERA6 249 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 RNASET2O00584 256 aaKnown RBP7.13□□□□□ -1.27
USP48-207ENST00000471752 ARHGEF9O43307 516 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 KIAA0513O60268 411 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 GPRIN2O60269 458 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 EIF4E2O60573 245 aaKnown RBP7.13□□□□□ -1.27
USP48-207ENST00000471752 CYTIPO60759 359 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 STX11O75558 287 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 SOX30O94993 753 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 GOSR1O95249 250 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 CSTAP01040 98 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 IGHV4-39P01824 125 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 KITP10721 976 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 IMPDH2P12268 514 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 PRG2P13727 222 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 FPR1P21462 350 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 UQCRC2P22695 453 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 ADH6P28332 368 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 EPHA3P29320 983 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 ACVR1BP36896 505 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 SERPINB5P36952 375 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 OR3A2P47893 321 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 DIO1P49895 249 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 MVDP53602 400 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 ATP5J2P56134 94 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 RAC3P60763 192 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 SLC25A3Q00325 362 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 FAPQ12884 760 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 FGFBP1Q14512 234 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 STK11Q15831 433 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 FAM174BQ3ZCQ3 159 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 SLC9B1Q4ZJI4 515 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 TMEM201Q5SNT2 666 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 CEP85LQ5SZL2 805 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 C9orf135Q5VTT2 229 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 ADAM5Q6NVV9 412 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 EMBQ6PCB8 327 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 C20orf204Q6ZNR8 217 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 TMPPEQ6ZT21 453 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 RIBC1Q8N443 379 aaPredicted RBP7.13□□□□□ -1.27
USP48-207ENST00000471752 MREGQ8N565 214 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 ZNF433Q8N7K0 673 aaPredicted RBP7.13□□□□□ -1.27
USP48-207ENST00000471752 ZNF611Q8N823 705 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 ANKRD42Q8N9B4 389 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 ZIC4Q8N9L1 334 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 FAM71CQ8NEG0 241 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 OR8J2Q8NGG1 315 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 OR52E4Q8NGH9 312 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 MIPOL1Q8TD10 442 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 MGARPQ8TDB4 240 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.13□□□□□ -1.27
USP48-207ENST00000471752 TRIM44Q96DX7 344 aaPredicted RBP7.13□□□□□ -1.27
USP48-207ENST00000471752 NEURL3Q96EH8 262 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 PRPF18Q99633 342 aaKnown RBP7.13□□□□□ -1.27
USP48-207ENST00000471752 PAIP2Q9BPZ3 127 aaKnown RBP7.13□□□□□ -1.27
USP48-207ENST00000471752 GSX2Q9BZM3 304 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 DPY30Q9C005 99 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 TRIM2Q9C040 744 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 SAP130Q9H0E3 1048 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 SLC38A1Q9H2H9 487 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 BCO1Q9HAY6 547 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 ACER3Q9NUN7 267 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 ATAD3AQ9NVI7 634 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 NOP53Q9NZM5 478 aaKnown RBP7.13□□□□□ -1.27
USP48-207ENST00000471752 MARCOQ9UEW3 520 aaPredicted RBP7.13□□□□□ -1.27
USP48-207ENST00000471752 HAO1Q9UJM8 370 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 EDARQ9UNE0 448 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 RAP2CQ9Y3L5 183 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 GPR45Q9Y5Y3 372 aa7.13□□□□□ -1.27
USP48-207ENST00000471752 CCDC154A6NI56 674 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 E7EQL1 145 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 H3BNH8 94 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 SULT2B1O00204 365 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 BIRC5O15392 142 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 RGS16O15492 202 aaPredicted RBP7.12□□□□□ -1.27
USP48-207ENST00000471752 THBS1P07996 1170 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 GKN3PP0CG01 181 aa7.12□□□□□ -1.27
USP48-207ENST00000471752 TFPIP10646 304 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms