RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 MRPL2Q5T653 305 aaKnown RBP6.88□□□□□ -1.31
TRIM59-204ENST00000471396 RNF220Q5VTB9 566 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 EEF1A1P5Q5VTE0 462 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 PRAMEF8Q5VWM4 474 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 PRAMEF7Q5VXH5 474 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 PPP4R4Q6NUP7 873 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 C3orf33Q6P1S2 294 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 DLEU7Q6UYE1 221 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 PLEKHM3Q6ZWE6 761 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 GDF7Q7Z4P5 450 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 GCNT2Q8N0V5 402 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 LILRA2Q8N149 483 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 DPP10Q8N608 796 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 OR10D3Q8NH80 312 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 BBS10Q8TAM1 723 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 FNDC9Q8TBE3 224 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 TMEM234Q8WY98 164 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 CNOT9Q92600 299 aaKnown RBP6.88□□□□□ -1.31
TRIM59-204ENST00000471396 RNASE6Q93091 150 aaKnown RBP6.88□□□□□ -1.31
TRIM59-204ENST00000471396 ZNF524Q96C55 264 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 INTS12Q96CB8 462 aaKnown RBP6.88□□□□□ -1.31
TRIM59-204ENST00000471396 LRRC46Q96FV0 321 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 ZNF845Q96IR2 970 aaPredicted RBP6.88□□□□□ -1.31
TRIM59-204ENST00000471396 CPPED1Q9BRF8 314 aaPredicted RBP6.88□□□□□ -1.31
TRIM59-204ENST00000471396 THUMPD3Q9BV44 507 aaKnown RBP6.88□□□□□ -1.31
TRIM59-204ENST00000471396 TRIM8Q9BZR9 551 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 PIGMQ9H3S5 423 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 IKZF5Q9H5V7 419 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 RNF122Q9H9V4 155 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 BCL2L10Q9HD36 194 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 ACER3Q9NUN7 267 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 DNAJB12Q9NXW2 375 aaKnown RBP6.88□□□□□ -1.31
TRIM59-204ENST00000471396 KLHL14Q9P2G3 628 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 FOXD3Q9UJU5 478 aaPredicted RBP6.88□□□□□ -1.31
TRIM59-204ENST00000471396 PACSIN3Q9UKS6 424 aa6.88□□□□□ -1.31
TRIM59-204ENST00000471396 MCTS1Q9ULC4 181 aaKnown RBP6.88□□□□□ -1.31
TRIM59-204ENST00000471396 ZNF443Q9Y2A4 671 aaPredicted RBP6.88□□□□□ -1.31
TRIM59-204ENST00000471396 FREM1Q5H8C1 2179 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 A0A0G2JPF8 293 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 A0A0J9YW62 118 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 CDHR4A6H8M9 788 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 A6NHS1 94 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 EVPLLA8MZ36 301 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 HNRNPCL2B2RXH8 293 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 HNRNPCL3B7ZW38 293 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 C5orf58C9J3I9 102 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 FAAHO00519 579 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 EFNA2O43921 213 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 HNRNPCL1O60812 293 aaKnown RBP6.87□□□□□ -1.31
TRIM59-204ENST00000471396 ADAM11O75078 769 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 AQP8O94778 261 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 SYNGR4O95473 234 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 OPN1LWP04000 364 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 HNRNPCL4P0DMR1 293 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 ARAFP10398 606 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 UQCRBP14927 111 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 SHC1P29353 583 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 SLC7A1P30825 629 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 UQCRC1P31930 480 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 RYKP34925 604 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 SFTPDP35247 375 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 PEX19P40855 299 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 AGFG1P52594 562 aaKnown RBP6.87□□□□□ -1.31
TRIM59-204ENST00000471396 SF3A3Q12874 501 aaKnown RBP eCLIP6.87□□□□□ -1.31
TRIM59-204ENST00000471396 NFYCQ13952 458 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 LARS2Q15031 903 aaKnown RBP6.87□□□□□ -1.31
TRIM59-204ENST00000471396 GUSBP1Q15486 140 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 MAPRE2Q15555 327 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 ZNF239Q16600 458 aaKnown RBP6.87□□□□□ -1.31
TRIM59-204ENST00000471396 ZSWIM7Q19AV6 140 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 HBMQ6B0K9 141 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 ZNF836Q6ZNA1 936 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 GRINAQ7Z429 371 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 VRK2Q86Y07 508 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 MCEMP1Q8IX19 187 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 DMRTC2Q8IXT2 367 aaPredicted RBP6.87□□□□□ -1.31
TRIM59-204ENST00000471396 ZNF440Q8IYI8 595 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 C10orf111Q8N326 155 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 CNEP1R1Q8N9A8 125 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 ATP6V1C2Q8NEY4 427 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 OR52P1PQ8NH57 321 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 ZNF563Q8TA94 476 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 SLC25A43Q8WUT9 341 aaPredicted RBP6.87□□□□□ -1.31
TRIM59-204ENST00000471396 C10orf82Q8WW14 230 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 MAL2Q969L2 176 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 CPNE4Q96A23 557 aaPredicted RBP6.87□□□□□ -1.31
TRIM59-204ENST00000471396 ZNF317Q96PQ6 595 aaPredicted RBP6.87□□□□□ -1.31
TRIM59-204ENST00000471396 CGREF1Q99674 301 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 PRRG4Q9BZD6 226 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 TMEM38AQ9H6F2 299 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 COQ10BQ9H8M1 238 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 SAR1AQ9NR31 198 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 SERINC1Q9NRX5 453 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 JKAMPQ9P055 326 aa6.87□□□□□ -1.31
TRIM59-204ENST00000471396 SPIN1Q9Y657 262 aaPredicted RBP6.87□□□□□ -1.31
TRIM59-204ENST00000471396 CFAP73A6NFT4 308 aa6.86□□□□□ -1.31
TRIM59-204ENST00000471396 BBIP1A8MTZ0 92 aa6.86□□□□□ -1.31
TRIM59-204ENST00000471396 SYT5O00445 386 aa6.86□□□□□ -1.31
TRIM59-204ENST00000471396 AP3D1O14617 1153 aa6.86□□□□□ -1.31
TRIM59-204ENST00000471396 MSTNO14793 375 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms