RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 CRIM1Q9NZV1 1036 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 LEF1Q9UJU2 399 aaPredicted RBP12.65□□□□□ -0.38
TOP3B-215ENST00000470338 NDUFAF1Q9Y375 327 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 ANKRD17O75179 2603 aaKnown RBP12.65□□□□□ -0.38
TOP3B-215ENST00000470338 A0A1W2PNR3 127 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 FAM221AA4D161 298 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 AP3D1O14617 1153 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 SMNDC1O75940 238 aaKnown RBP eCLIP12.64□□□□□ -0.39
TOP3B-215ENST00000470338 VIMP08670 466 aaKnown RBP12.64□□□□□ -0.39
TOP3B-215ENST00000470338 PABPC4LP0CB38 370 aaKnown RBP12.64□□□□□ -0.39
TOP3B-215ENST00000470338 ARAFP10398 606 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 FKBP2P26885 142 aaKnown RBP12.64□□□□□ -0.39
TOP3B-215ENST00000470338 SLC7A1P30825 629 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 HTR3AP46098 478 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 CPA2P48052 419 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 IDH2P48735 452 aaKnown RBP12.64□□□□□ -0.39
TOP3B-215ENST00000470338 EPS8Q12929 822 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 DAZAP2Q15038 168 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-215ENST00000470338 ZSWIM7Q19AV6 140 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 LIN52Q52LA3 116 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 RUNDC3AQ59EK9 446 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 RPS26P11Q5JNZ5 115 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-215ENST00000470338 RNF220Q5VTB9 566 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 PPP4R4Q6NUP7 873 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 ZNF474Q6S9Z5 364 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-215ENST00000470338 ZNF836Q6ZNA1 936 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 RETREG3Q86VR2 466 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 ADGRG3Q86Y34 549 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 ZZZ3Q8IYH5 903 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 ZNF440Q8IYI8 595 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 OR6K3Q8NGY3 331 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 RNF128Q8TEB7 428 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 SLC25A43Q8WUT9 341 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-215ENST00000470338 ROBO4Q8WZ75 1007 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 MAL2Q969L2 176 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 OPN3Q9H1Y3 402 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-215ENST00000470338 IKZF5Q9H5V7 419 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 CTPS2Q9NRF8 586 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 RLIMQ9NVW2 624 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 ZNF232Q9UNY5 417 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 CORO2BQ9UQ03 480 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 ZNF443Q9Y2A4 671 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-215ENST00000470338 IFT52Q9Y366 437 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 EMC9Q9Y3B6 208 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 CHST2Q9Y4C5 530 aa12.64□□□□□ -0.39
TOP3B-215ENST00000470338 SPG11Q96JI7 2443 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 ABCA4P78363 2273 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 CFAP73A6NFT4 308 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 TUBAL3A6NHL2 446 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 EVPLLA8MZ36 301 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 PGM3O95394 542 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 PLGP00747 810 aaPredicted RBP12.63□□□□□ -0.39
TOP3B-215ENST00000470338 EPXP11678 715 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 ETS2P15036 469 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 CD79BP40259 229 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 MDH1P40925 334 aaKnown RBP12.63□□□□□ -0.39
TOP3B-215ENST00000470338 ACAA2P42765 397 aaKnown RBP12.63□□□□□ -0.39
TOP3B-215ENST00000470338 SLC1A3P43003 542 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 CLK1P49759 484 aaKnown RBP12.63□□□□□ -0.39
TOP3B-215ENST00000470338 ARFIP2P53365 341 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 CTBP2P56545 445 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 LARS2Q15031 903 aaKnown RBP12.63□□□□□ -0.39
TOP3B-215ENST00000470338 RNPS1Q15287 305 aaKnown RBP12.63□□□□□ -0.39
TOP3B-215ENST00000470338 SYT14P1Q58G82 188 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 GCNT6Q5T4J0 391 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 TMPPEQ6ZT21 453 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 FCRLAQ7L513 359 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 CLIP4Q8N3C7 705 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 ZNF610Q8N9Z0 462 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 BBS10Q8TAM1 723 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 LINC01560Q8TB33 94 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 REXO5Q96IC2 774 aaKnown RBP12.63□□□□□ -0.39
TOP3B-215ENST00000470338 CPPED1Q9BRF8 314 aaPredicted RBP12.63□□□□□ -0.39
TOP3B-215ENST00000470338 SPATA9Q9BWV2 254 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 ADAM19Q9H013 955 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 TMEM38AQ9H6F2 299 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 GP6Q9HCN6 339 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 MRGBPQ9NV56 204 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 ELOVL5Q9NYP7 299 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 CHRNA9Q9UGM1 479 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 CLEC4AQ9UMR7 237 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 PROCRQ9UNN8 238 aa12.63□□□□□ -0.39
TOP3B-215ENST00000470338 SPIN1Q9Y657 262 aaPredicted RBP12.63□□□□□ -0.39
TOP3B-215ENST00000470338 C5orf58C9J3I9 102 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 ANGPT2O15123 496 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 CTAG2O75638 210 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 PRKD3O94806 890 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 GKN3PP0CG01 181 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 ENPP1P22413 925 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 AGTR1P30556 359 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 POLR2HP52434 150 aaKnown RBP12.62□□□□□ -0.39
TOP3B-215ENST00000470338 MAP2K6P52564 334 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 CDK6Q00534 326 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 FAM27E3Q08E93 113 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 ADRM1Q16186 407 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 REEP3Q6NUK4 255 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 DHDDSQ86SQ9 333 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 SLC43A2Q8N370 569 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 ABHD3Q8WU67 409 aa12.62□□□□□ -0.39
TOP3B-215ENST00000470338 ANKRD27Q96NW4 1050 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms