RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 NODALQ96S42 347 aa7.97□□□□□ -1.13
SYNGAP1-205ENST00000470232 USB1Q9BQ65 265 aaKnown RBP7.97□□□□□ -1.13
SYNGAP1-205ENST00000470232 SLC52A3Q9NQ40 469 aa7.97□□□□□ -1.13
SYNGAP1-205ENST00000470232 DDX18Q9NVP1 670 aaKnown RBP7.97□□□□□ -1.13
SYNGAP1-205ENST00000470232 MAGEL2Q9UJ55 1249 aa7.97□□□□□ -1.13
SYNGAP1-205ENST00000470232 POLR3HQ9Y535 204 aaPredicted RBP7.97□□□□□ -1.13
SYNGAP1-205ENST00000470232 TNPO3Q9Y5L0 923 aaKnown RBP7.97□□□□□ -1.13
SYNGAP1-205ENST00000470232 MEGF8Q7Z7M0 2845 aa7.96□□□□□ -1.13
SYNGAP1-205ENST00000470232 ELOA3DA6NLF2 546 aaPredicted RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 SAP18O00422 153 aaKnown RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 EI24O14681 340 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 GSTA4O15217 222 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 ZIC3O60481 467 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 TRMUO75648 421 aaKnown RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 AIFM1O95831 613 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 NR2F6P10588 404 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 NT5EP21589 574 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 PTX3P26022 381 aaPredicted RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 IL12AP29459 219 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 PHEXP78562 749 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 HPCAP84074 193 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 SRSF2Q01130 221 aaKnown RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 HMGCS1Q01581 520 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 CHIT1Q13231 466 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 GTF2H2Q13888 395 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 EFR3AQ14156 821 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 PON3Q15166 354 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 RAB35Q15286 201 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 TGFBIQ15582 683 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 C18orf21Q32NC0 220 aaPredicted RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 ELOA3BQ3SY89 546 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 SLC36A3Q495N2 470 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 CDKL4Q5MAI5 379 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 C6orf136Q5SQH8 315 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 NCMAPQ5T1S8 102 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 AGAP6Q5VW22 663 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 GTF2IRD2BQ6EKJ0 949 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 SULT1C3Q6IMI6 304 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 ADNP2Q6IQ32 1131 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 GTF2H2CQ6P1K8 395 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 SLC2A7Q6PXP3 512 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 GOLGA7Q7Z5G4 137 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 GTF2IRD2Q86UP8 949 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 CLVS1Q8IUQ0 354 aaPredicted RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 ERI1Q8IV48 349 aaKnown RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 PAPD5Q8NDF8 572 aaKnown RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 ELOA3Q8NG57 546 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 OR4K14Q8NGD5 310 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 OR2T11Q8NH01 316 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 LILRB1Q8NHL6 650 aaPredicted RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 B4GALNT2Q8NHY0 566 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 FNDC9Q8TBE3 224 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 METTL6Q8TCB7 284 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 HSD17B8Q92506 261 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 PROX1Q92786 737 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 ESAMQ96AP7 390 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 TMIGD2Q96BF3 282 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 GMPPAQ96IJ6 420 aaPredicted RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 TRAF4Q9BUZ4 470 aaPredicted RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 ADAM19Q9H013 955 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 NXF5Q9H1B4 397 aaKnown RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 OR51B5Q9H339 312 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 GLRX2Q9NS18 164 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 CISD1Q9NZ45 108 aaKnown RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 PRODH2Q9UF12 536 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 GDF2Q9UK05 429 aaPredicted RBP7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 OAZ3Q9UMX2 235 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 ANGPTL3Q9Y5C1 460 aa7.96□□□□□ -1.14
SYNGAP1-205ENST00000470232 FREM1Q5H8C1 2179 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 YLPM1P49750 1951 aaKnown RBP7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 EXPH5Q8NEV8 1989 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 OR6C70A6NIJ9 312 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 GLOD5A6NK44 160 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 TRIM64CA6NLI5 447 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 SLC28A1O00337 649 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 SEC14L5O43304 696 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 KCNAB3O43448 404 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 NOL3O60936 208 aaKnown RBP7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 NDUFS7O75251 213 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 UGT2B11O75310 529 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 REM1O75628 298 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 NPPAP01160 153 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 CSF3P09919 207 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 PORP16435 677 aaPredicted RBP7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 CDH2P19022 906 aaPredicted RBP7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 HK1P19367 917 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 PSMB1P20618 241 aaKnown RBP7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 USF1P22415 310 aaPredicted RBP7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 KRT20P35900 424 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 HSPA7P48741 367 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 XKP51811 444 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 PSPHP78330 225 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 GANABQ14697 944 aaKnown RBP7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 GUSBP1Q15486 140 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 PGGHGQ32M88 737 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 ZBED5Q49AG3 693 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 FAM120AOSQ5T036 256 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 RAET1LQ5VY80 246 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 GLYATQ6IB77 296 aa7.95□□□□□ -1.14
SYNGAP1-205ENST00000470232 NANOGP8Q6NSW7 305 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms