RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 CXCR1P25024 350 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 TACR3P29371 465 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 HSF1Q00613 529 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 FOXF1Q12946 379 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 TOMM34Q15785 309 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 C4orf17Q53FE4 359 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 IFI44LQ53G44 452 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 FKBP9P1Q75LS8 142 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 DHFR2Q86XF0 187 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 ADGRG3Q86Y34 549 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 ULK2Q8IYT8 1036 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 CADM2Q8N3J6 435 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 PHF10Q8WUB8 498 aaKnown RBP11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 DDIT4LQ96D03 193 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 TPD52L3Q96J77 140 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 MPP4Q96JB8 637 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 POTEKPQ9BYX7 375 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 LRMDAQ9H2I8 198 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 EGFL7Q9UHF1 273 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 OSGIN1Q9UJX0 560 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 USP22Q9UPT9 525 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 TRAPPC4Q9Y296 219 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 HDGFL3Q9Y3E1 203 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 ZNF175Q9Y473 711 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 SVILO95425 2214 aa11.39□□□□□ -0.59
SPTLC1-204ENST00000469778 TMED7-TICAM2A0A0A6YYA0 188 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 A8MVM7 634 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 H0Y3Z8 333 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 H3BML4 177 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 ARPC2O15144 300 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 ADAM11O75078 769 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 ZNF682O95780 498 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 OPN1SWP03999 348 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 FCGR2AP12318 317 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 TCN1P20061 433 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 SLC7A1P30825 629 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 RNF144AP50876 292 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 CARD18P57730 90 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 CSNK2A1P68400 391 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 MRPL49Q13405 166 aaKnown RBP11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 EIF2S3LQ2VIR3 472 aaKnown RBP11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 GLIPR1L2Q4G1C9 344 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 EMC4Q5J8M3 183 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 NSUN5P2Q63ZY6 315 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 GTF2IRD2BQ6EKJ0 949 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 LCN8Q6JVE9 175 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 GTF2IRD2Q86UP8 949 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 CYP4Z1Q86W10 505 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 CARM1Q86X55 608 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 LACC1Q8IV20 430 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 OR6T1Q8NGN1 323 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 PRR7Q8TB68 274 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 STK35Q8TDR2 534 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 WNT2BQ93097 391 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 SLC38A4Q969I6 547 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 PYURFQ96I23 114 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 LRGUKQ96M69 825 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 KLHL15Q96M94 604 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 ZFP3Q96NJ6 502 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 MCHR1Q99705 422 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 TM9SF2Q99805 663 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 RSPO3Q9BXY4 272 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 PNPLA3Q9NST1 481 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 CAMK2AQ9UQM7 478 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 MEMO1Q9Y316 297 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 TMED7Q9Y3B3 224 aa11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 SMG1Q96Q15 3661 aaKnown RBP11.38□□□□□ -0.59
SPTLC1-204ENST00000469778 DNAJC13O75165 2243 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 ZNF407Q9C0G0 2248 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 NBASA2RRP1 2371 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 A0A0B4J2E0 115 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 TRGV8A0A0C4DH27 118 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 A0A1B0GWA3 101 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 A0A1B0GX12 115 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 TRAPPC13A5PLN9 417 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 ELOA3DA6NLF2 546 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 AQP12BA6NM10 295 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 TMEM229AB2RXF0 380 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 OR2T1O43869 369 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 EFNA2O43921 213 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 OR5F1O95221 314 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 UMPSP11172 480 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 PRG2P13727 222 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 NCK1P16333 377 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 TIMP3P35625 211 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 STARP49675 285 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 RAC3P60763 192 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 OR1Q1Q15612 314 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 C3AR1Q16581 482 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 SGCBQ16585 318 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 ELOA3BQ3SY89 546 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 TMEM176BQ3YBM2 270 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 SYT14P1Q58G82 188 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 ALG10BQ5I7T1 473 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 C1orf185Q5T7R7 199 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 OR2A2Q6IF42 318 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 ZNF585AQ6P3V2 769 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 B3GNT6Q6ZMB0 384 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 ADGRE4PQ86SQ3 457 aa11.37□□□□□ -0.59
SPTLC1-204ENST00000469778 ATG4DQ86TL0 474 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms