RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 C6orf10Q5SRN2 563 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 CPTPQ5TA50 214 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 ADNP2Q6IQ32 1131 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 NOXRED1Q6NXP6 359 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 SLC48A1Q6P1K1 146 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 SCIMPQ6UWF3 145 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 RTL4Q6ZR62 310 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 RNF165Q6ZSG1 346 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 SH2D5Q6ZV89 423 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 IGFN1Q86VF2 1251 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 OR4N5Q8IXE1 308 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 BEST3Q8N1M1 668 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 ZNF843Q8N446 348 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 RNF175Q8N4F7 328 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 TRIML2Q8N7C3 387 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 NUBPLQ8TB37 319 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 C16orf78Q8WTQ4 265 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 RNF125Q96EQ8 232 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 SENP5Q96HI0 755 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-208ENST00000469585 MPP4Q96JB8 637 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 MAGED4Q96JG8 741 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 IMMP1LQ96LU5 166 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 KCNA7Q96RP8 456 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 DPY30Q9C005 99 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 CXorf56Q9H5V9 222 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 EXO5Q9H790 373 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 MYNNQ9NPC7 610 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 PNRC2Q9NPJ4 139 aaKnown RBP5.7□□□□□ -1.5
PTCD3-208ENST00000469585 MED4Q9NPJ6 270 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 SLC35C2Q9NQQ7 365 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 OLAHQ9NV23 265 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 BEX4Q9NWD9 120 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-208ENST00000469585 TUBA8Q9NY65 449 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-208ENST00000469585 HEY2Q9UBP5 337 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 BOKQ9UMX3 212 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-208ENST00000469585 ERVK-19Q9WJR5 959 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 POLR3HQ9Y535 204 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-208ENST00000469585 ASB4Q9Y574 426 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 USP24Q9UPU5 2620 aa5.7□□□□□ -1.5
PTCD3-208ENST00000469585 NUP210LQ5VU65 1888 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 GAGE10A6NGK3 116 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 DNAJC9-AS1A6NH13 148 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 A6NNC1 897 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 TEX22C9J3V5 150 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 WWP2O00308 870 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 ACOX3O15254 700 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 POLR3GO15318 223 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-208ENST00000469585 HDAC3O15379 428 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 OR2J2O76002 312 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 ETHE1O95571 254 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 WDPCPO95876 746 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 ADAP00813 363 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 PRB1P04280 392 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 ATP1B1P05026 303 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 CHRNGP07510 517 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 VIMP08670 466 aaKnown RBP5.69□□□□□ -1.5
PTCD3-208ENST00000469585 TROVE2P10155 538 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTCD3-208ENST00000469585 ZNF24P17028 368 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 LBPP18428 481 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 CD53P19397 219 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 NR1D1P20393 614 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 TNFSF10P50591 281 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 HLCSP50747 726 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 CDH15P55291 814 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 MLF1P58340 268 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 KCNJ2P63252 427 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 RPP30P78346 268 aaKnown RBP5.69□□□□□ -1.5
PTCD3-208ENST00000469585 IRX1P78414 480 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-208ENST00000469585 PLCXD2Q0VAA5 305 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 SF3B4Q15427 424 aaKnown RBP eCLIP5.69□□□□□ -1.51e-6■■□□□ 12.3
PTCD3-208ENST00000469585 RBMS2Q15434 407 aaKnown RBP5.69□□□□□ -1.5
PTCD3-208ENST00000469585 TCHHL1Q5QJ38 904 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-208ENST00000469585 ANXA8L1Q5VT79 327 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 SLC22A10Q63ZE4 541 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 TMEM198Q66K66 360 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 SLC25A25Q6KCM7 469 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 RPUSD3Q6P087 351 aaKnown RBP5.69□□□□□ -1.5
PTCD3-208ENST00000469585 IL20RBQ6UXL0 311 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 RGS9BPQ6ZS82 235 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 Q6ZS92 163 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 FAM47EQ6ZV65 393 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 SPATA19Q7Z5L4 167 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 SLC22A16Q86VW1 577 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 TICAM1Q8IUC6 712 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 LRRC34Q8IZ02 419 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 LIX1Q8N485 282 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 PCYOX1LQ8NBM8 494 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 TNIP2Q8NFZ5 429 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 ELP5Q8TE02 316 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 RPL36ALQ969Q0 106 aaKnown RBP5.69□□□□□ -1.5
PTCD3-208ENST00000469585 PPWD1Q96BP3 646 aaKnown RBP5.69□□□□□ -1.5
PTCD3-208ENST00000469585 MOAP1Q96BY2 351 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 TMCO6Q96DC7 493 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 PPP1R36Q96LQ0 422 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 JSRP1Q96MG2 331 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-208ENST00000469585 TSSK3Q96PN8 268 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 SIKE1Q9BRV8 207 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 REEP4Q9H6H4 257 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 RMND5AQ9H871 391 aa5.69□□□□□ -1.5
PTCD3-208ENST00000469585 METTL7AQ9H8H3 244 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms