RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 KLHL17Q6TDP4 642 aa11.49□□□□□ -0.57
PTPN7-207ENST00000468385 MTDHQ86UE4 582 aaKnown RBP11.49□□□□□ -0.57
PTPN7-207ENST00000468385 UBE2J2Q8N2K1 259 aa11.49□□□□□ -0.57
PTPN7-207ENST00000468385 OR5D16Q8NGK9 328 aa11.49□□□□□ -0.57
PTPN7-207ENST00000468385 OR5P2Q8WZ92 322 aa11.49□□□□□ -0.57
PTPN7-207ENST00000468385 ST8SIA1Q92185 356 aa11.49□□□□□ -0.57
PTPN7-207ENST00000468385 ARL8AQ96BM9 186 aa11.49□□□□□ -0.57
PTPN7-207ENST00000468385 MUS81Q96NY9 551 aa11.49□□□□□ -0.57
PTPN7-207ENST00000468385 OR7D2Q96RA2 312 aa11.49□□□□□ -0.57
PTPN7-207ENST00000468385 SDF2Q99470 211 aa11.49□□□□□ -0.57
PTPN7-207ENST00000468385 INPP5KQ9BT40 448 aa11.49□□□□□ -0.57
PTPN7-207ENST00000468385 THUMPD3Q9BV44 507 aaKnown RBP11.49□□□□□ -0.57
PTPN7-207ENST00000468385 LAT2Q9GZY6 243 aa11.49□□□□□ -0.57
PTPN7-207ENST00000468385 EMC3Q9P0I2 261 aa11.49□□□□□ -0.57
PTPN7-207ENST00000468385 KCNE5Q9UJ90 142 aa11.49□□□□□ -0.57
PTPN7-207ENST00000468385 CENPVL1A0A0U1RR11 272 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 CCT8L1PA6NM43 557 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 M0R1B8 84 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 SULT2B1O00204 365 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 LY6HO94772 140 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 C6orf47O95873 294 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 KRT16P08779 473 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 CSF3P09919 207 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 DDX5P17844 614 aaKnown RBP11.48□□□□□ -0.57
PTPN7-207ENST00000468385 USF1P22415 310 aaPredicted RBP11.48□□□□□ -0.57
PTPN7-207ENST00000468385 CRHR1P34998 444 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 CCT5P48643 541 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 EFNA4P52798 201 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 CSNK2A1P68400 391 aaPredicted RBP11.48□□□□□ -0.57
PTPN7-207ENST00000468385 GABRA6Q16445 453 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 SYT14P1Q58G82 188 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 IL17RELQ6ZVW7 336 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 C10orf107Q8IVU9 208 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 CNPY4Q8N129 248 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 DEPDC4Q8N2C3 294 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 CCDC63Q8NA47 563 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 SFXN5Q8TD22 340 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 TWIST2Q8WVJ9 160 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 APH1AQ96BI3 265 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 GATA5Q9BWX5 397 aaPredicted RBP11.48□□□□□ -0.57
PTPN7-207ENST00000468385 TXLNGYQ9BZA5 131 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 NMUR2Q9GZQ4 415 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 SERHL2Q9H4I8 314 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 SERINC1Q9NRX5 453 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 ASB6Q9NWX5 421 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 TAS2R16Q9NYV7 291 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 GIMAP2Q9UG22 337 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 NOSIPQ9Y314 301 aaKnown RBP11.48□□□□□ -0.57
PTPN7-207ENST00000468385 PLCE1Q9P212 2302 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 NBEAL1Q6ZS30 2694 aa11.48□□□□□ -0.57
PTPN7-207ENST00000468385 SLC35F4A4IF30 521 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 VWC2LB2RUY7 222 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 TMEM114B3SHH9 223 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 TMEM233B4DJY2 109 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 PDLIM1O00151 329 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 PIP5K1BO14986 540 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 CYP7B1O75881 506 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 CHEK2O96017 543 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 ITGA5P08648 1049 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 FAM153BP0C7A2 387 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 SRD5A1P18405 259 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 RPL3P39023 403 aaKnown RBP11.47□□□□□ -0.57
PTPN7-207ENST00000468385 GZMKP49863 264 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 MERTKQ12866 999 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 PTGR1Q14914 329 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 GPR68Q15743 365 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 ZNF141Q15928 474 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 UGT3A2Q3SY77 523 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 FAM153CQ494X1 144 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 SPDYE7PQ495Y7 208 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 OLIG3Q7RTU3 272 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 DDIASQ8IXT1 998 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 WDR31Q8NA23 367 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 OR52E4Q8NGH9 312 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 OR5AK3PQ8NH89 298 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 SLC25A43Q8WUT9 341 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-207ENST00000468385 TMEM234Q8WY98 164 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 COQ8BQ96D53 544 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 C1QTNF6Q9BXI9 259 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 ACER3Q9NUN7 267 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 MALT1Q9UDY8 824 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 TRAF6Q9Y4K3 522 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 ATP23Q9Y6H3 246 aa11.47□□□□□ -0.57
PTPN7-207ENST00000468385 FCMRO60667 390 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 UGT2B17O75795 530 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 CSTAP01040 98 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 CHRNGP07510 517 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 FGF4P08620 206 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 UBTFL6P0CB48 400 aaPredicted RBP11.46□□□□□ -0.57
PTPN7-207ENST00000468385 PGCP20142 388 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 APOBEC3AP31941 199 aaPredicted RBP11.46□□□□□ -0.57
PTPN7-207ENST00000468385 SLC16A1P53985 500 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 RPS26P62854 115 aaKnown RBP11.46□□□□□ -0.57
PTPN7-207ENST00000468385 SLC25A3Q00325 362 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 PCLAFQ15004 111 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 LSM12Q3MHD2 195 aaKnown RBP11.46□□□□□ -0.57
PTPN7-207ENST00000468385 FAM120AOSQ5T036 256 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 OR7E24Q6IFN5 339 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 FAM166AQ6J272 317 aa11.46□□□□□ -0.57
PTPN7-207ENST00000468385 KRTCAP2Q8N6L1 136 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms