RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 SLC25A37Q9NYZ2 338 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 C6orf203Q9P0P8 240 aaPredicted RBP10.3□□□□□ -0.76
CDHR3-205ENST00000468143 ITPR2Q14571 2701 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 DOCK7Q96N67 2140 aa10.3□□□□□ -0.76
CDHR3-205ENST00000468143 INTS1Q8N201 2190 aaKnown RBP10.29□□□□□ -0.76
CDHR3-205ENST00000468143 CENPEQ02224 2701 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 TEX15Q9BXT5 2789 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 A0A096LPI6 279 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 SMAD9O15198 467 aaKnown RBP10.29□□□□□ -0.76
CDHR3-205ENST00000468143 PABPC4LP0CB38 370 aaKnown RBP10.29□□□□□ -0.76
CDHR3-205ENST00000468143 HOXB9P17482 250 aaPredicted RBP10.29□□□□□ -0.76
CDHR3-205ENST00000468143 RPS4Y1P22090 263 aaKnown RBP10.29□□□□□ -0.76
CDHR3-205ENST00000468143 APOBEC1P41238 236 aaKnown RBP10.29□□□□□ -0.76
CDHR3-205ENST00000468143 DIO1P49895 249 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 IST1P53990 364 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 CRISP3P54108 245 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 RAC3P60763 192 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 GNA13Q14344 377 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 SQLEQ14534 574 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 SYT14P1Q58G82 188 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 TMEM201Q5SNT2 666 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 ZNF836Q6ZNA1 936 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 TMPPEQ6ZT21 453 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 GRINAQ7Z429 371 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 MSRB3Q8IXL7 192 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 CMIPQ8IY22 773 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 C10orf111Q8N326 155 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 CLIP4Q8N3C7 705 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 ARL5BQ96KC2 179 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 MED18Q9BUE0 208 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 OR11A1Q9GZK7 315 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 EXOSC3Q9NQT5 275 aaKnown RBP10.29□□□□□ -0.76
CDHR3-205ENST00000468143 CCM2LQ9NUG4 571 aaPredicted RBP10.29□□□□□ -0.76
CDHR3-205ENST00000468143 PLEKHA6Q9Y2H5 1048 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 TESMINQ9Y4I5 508 aa10.29□□□□□ -0.76
CDHR3-205ENST00000468143 TMED7-TICAM2A0A0A6YYA0 188 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 A0A0G2JND7 137 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 A0A0G2JPF8 293 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 TMEM72A0PK05 275 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 TMEM247A6NEH6 219 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 CFAP73A6NFT4 308 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 HNRNPCL2B2RXH8 293 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 HNRNPCL3B7ZW38 293 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 SULT2B1O00204 365 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 HNRNPCL1O60812 293 aaKnown RBP10.28□□□□□ -0.76
CDHR3-205ENST00000468143 HRGP04196 525 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 FESP07332 822 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 YES1P07947 543 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 HNRNPCL4P0DMR1 293 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 TACR3P29371 465 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 CCKARP32238 428 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 MAGEA8P43361 318 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 ATP4BP51164 291 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 EPS8Q12929 822 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 RNPS1Q15287 305 aaKnown RBP10.28□□□□□ -0.76
CDHR3-205ENST00000468143 TSC22D1Q15714 1073 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 LIN52Q52LA3 116 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 LRIF1Q5T3J3 769 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 ALKBH2Q6NS38 261 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.28□□□□□ -0.76
CDHR3-205ENST00000468143 CADM2Q8N3J6 435 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 PMM1Q92871 262 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 ZNF300Q96RE9 604 aaPredicted RBP10.28□□□□□ -0.76
CDHR3-205ENST00000468143 CALML5Q9NZT1 146 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 VAPAQ9P0L0 249 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 KLHL13Q9P2N7 655 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.28□□□□□ -0.76
CDHR3-205ENST00000468143 CHRNA9Q9UGM1 479 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 OSGIN1Q9UJX0 560 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 ING1Q9UK53 422 aaPredicted RBP10.28□□□□□ -0.76
CDHR3-205ENST00000468143 ZNF232Q9UNY5 417 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 ZNF443Q9Y2A4 671 aaPredicted RBP10.28□□□□□ -0.76
CDHR3-205ENST00000468143 TMED7Q9Y3B3 224 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 CHST2Q9Y4C5 530 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 DSPPQ9NZW4 1301 aa10.28□□□□□ -0.76
CDHR3-205ENST00000468143 MED12LQ86YW9 2145 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 A0A1W2PP18 115 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 A0A1W2PPR1 153 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 CDHR4A6H8M9 788 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 SIAH2O43255 324 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 PRG2P13727 222 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 POLR2HP52434 150 aaKnown RBP10.27□□□□□ -0.77
CDHR3-205ENST00000468143 ART1P52961 327 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 OR2B6P58173 313 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 HOXC5Q00444 222 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 RASGEF1BQ0VAM2 473 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 LARS2Q15031 903 aaKnown RBP10.27□□□□□ -0.77
CDHR3-205ENST00000468143 ZNF311Q5JNZ3 666 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 STAC2Q6ZMT1 411 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 BEND4Q6ZU67 534 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 STK32CQ86UX6 486 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 SLC43A2Q8N370 569 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 NFKBIDQ8NI38 313 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 SLC25A43Q8WUT9 341 aaPredicted RBP10.27□□□□□ -0.77
CDHR3-205ENST00000468143 PIK3IP1Q96FE7 263 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 PSD2Q9BQI7 771 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 RAD21L1Q9H4I0 556 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 IKZF5Q9H5V7 419 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 PLEKHF2Q9H8W4 249 aa10.27□□□□□ -0.77
CDHR3-205ENST00000468143 A4GALTQ9NPC4 353 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms