RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 PLEKP08567 350 aaPredicted RBP2.29□□□□□ -2.04
ATG3-204ENST00000467275 BCKDHAP12694 445 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 TSPAN8P19075 237 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 PAICSP22234 425 aaKnown RBP2.29□□□□□ -2.04
ATG3-204ENST00000467275 CYP2F1P24903 491 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 MDH1P40925 334 aaKnown RBP2.29□□□□□ -2.04
ATG3-204ENST00000467275 ACAA2P42765 397 aaKnown RBP2.29□□□□□ -2.04
ATG3-204ENST00000467275 PTGFRP43088 359 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 POLR2FP61218 127 aaKnown RBP2.29□□□□□ -2.04
ATG3-204ENST00000467275 SLC10A7Q0GE19 358 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 ST3GAL3Q11203 375 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 EXOSC2Q13868 293 aaKnown RBP2.29□□□□□ -2.04
ATG3-204ENST00000467275 TFDP1Q14186 410 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 TMEM41BQ5BJD5 291 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 LRRC8BQ6P9F7 803 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 SLC25A34Q6PIV7 304 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 WASH2PQ6VEQ5 465 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 LPCAT2Q7L5N7 544 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 LRRC70Q7Z2Q7 622 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 ERASQ7Z444 233 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 LHFPL4Q7Z7J7 247 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 CBWD2Q8IUF1 395 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 EFCAB13Q8IY85 973 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 GCNT2Q8N0V5 402 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 TEX9Q8N6V9 391 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 ZSCAN4Q8NAM6 433 aaPredicted RBP2.29□□□□□ -2.04
ATG3-204ENST00000467275 OR5AU1Q8NGC0 362 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 GIPC3Q8TF64 312 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 RSPH1Q8WYR4 309 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 UPRTQ96BW1 309 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 CEP170P1Q96L14 293 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 TSNARE1Q96NA8 513 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 TSGA13Q96PP4 275 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 GPA33Q99795 319 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 NRIP2Q9BQI9 281 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 RIOK1Q9BRS2 568 aaKnown RBP2.29□□□□□ -2.04
ATG3-204ENST00000467275 TBCDQ9BTW9 1192 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 DPH5Q9H2P9 285 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 TPK1Q9H3S4 243 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 PPDPFQ9H3Y8 114 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 LPAR2Q9HBW0 351 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 AGPAT5Q9NUQ2 364 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 C1orf123Q9NWV4 160 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 ATP6V1HQ9UI12 483 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 EIF3LQ9Y262 564 aaKnown RBP2.29□□□□□ -2.04
ATG3-204ENST00000467275 USP16Q9Y5T5 823 aa2.29□□□□□ -2.04
ATG3-204ENST00000467275 CCDC7Q96M83 1385 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 MAP3K15Q6ZN16 1313 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 WASHC1A8K0Z3 465 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 ZNF705EA8MWA4 302 aaPredicted RBP2.28□□□□□ -2.04
ATG3-204ENST00000467275 C11orf94C9JXX5 98 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 SDHDO14521 159 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 FAM189A1O60320 539 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 SMPD2O60906 423 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 ZNF780AO75290 641 aaPredicted RBP2.28□□□□□ -2.04
ATG3-204ENST00000467275 OR4F21O95013 312 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 IFNB1P01574 187 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 PTMAP06454 111 aaKnown RBP2.28□□□□□ -2.04
ATG3-204ENST00000467275 HEXBP07686 556 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 H2AFXP16104 143 aaPredicted RBP2.28□□□□□ -2.04
ATG3-204ENST00000467275 ZNF14P17017 642 aaPredicted RBP2.28□□□□□ -2.04
ATG3-204ENST00000467275 HOXA9P31269 272 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 CYLC1P35663 651 aaPredicted RBP2.28□□□□□ -2.04
ATG3-204ENST00000467275 ZNF311Q5JNZ3 666 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 ATF7IP2Q5U623 682 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 Q5W150 140 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 SCYL2Q6P3W7 929 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 AFTPHQ6ULP2 937 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 CBLN3Q6UW01 205 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 FADS6Q8N9I5 356 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 OR6X1Q8NH79 312 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 C16orf45Q96MC5 204 aaPredicted RBP2.28□□□□□ -2.04
ATG3-204ENST00000467275 VPS35Q96QK1 796 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 SPIN2AQ99865 258 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 SPIN2BQ9BPZ2 258 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 ZNF2Q9BSG1 426 aaPredicted RBP2.28□□□□□ -2.04
ATG3-204ENST00000467275 SLC25A51Q9H1U9 297 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 RWDD1Q9H446 243 aaPredicted RBP2.28□□□□□ -2.04
ATG3-204ENST00000467275 COQ10BQ9H8M1 238 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 SLC25A22Q9H936 323 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 CALHM2Q9HA72 323 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 ISY1Q9ULR0 285 aaKnown RBP2.28□□□□□ -2.04
ATG3-204ENST00000467275 RNF6Q9Y252 685 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 ATP6V0A2Q9Y487 856 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 MFHAS1Q9Y4C4 1052 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 UGT2A1Q9Y4X1 527 aa2.28□□□□□ -2.04
ATG3-204ENST00000467275 IGLV2-18A0A075B6J9 118 aa2.27□□□□□ -2.05
ATG3-204ENST00000467275 A0A1B0GWJ7 208 aa2.27□□□□□ -2.05
ATG3-204ENST00000467275 GFYI3L273 518 aa2.27□□□□□ -2.05
ATG3-204ENST00000467275 OR10H3O60404 316 aa2.27□□□□□ -2.05
ATG3-204ENST00000467275 KIAA0754O94854 1291 aa2.27□□□□□ -2.05
ATG3-204ENST00000467275 RETP07949 1114 aa2.27□□□□□ -2.05
ATG3-204ENST00000467275 MRPL3P09001 348 aaKnown RBP2.27□□□□□ -2.05
ATG3-204ENST00000467275 NCF1P14598 390 aaPredicted RBP2.27□□□□□ -2.05
ATG3-204ENST00000467275 UQCRBP14927 111 aa2.27□□□□□ -2.05
ATG3-204ENST00000467275 DESP17661 470 aa2.27□□□□□ -2.05
ATG3-204ENST00000467275 ACADVLP49748 655 aa2.27□□□□□ -2.05
ATG3-204ENST00000467275 NAPAP54920 295 aa2.27□□□□□ -2.05
ATG3-204ENST00000467275 TRIP10Q15642 601 aa2.27□□□□□ -2.05
ATG3-204ENST00000467275 DEFB116Q30KQ4 102 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms